FFCP PHASE1:Hg19::chr2:234601527..234601551,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |||
|TSSclassifier=strong | |||
|UniProt=P19224,Q5DSZ8 | |||
|association_with_transcript=15bp_to_ENST00000305139,NM_001072,uc002vuv.3,uc010zmy.1_5end | |||
|cluster_id=chr2:234601527..234601551,+ | |||
|coexpression_cluster_id=C1504 | |||
|description=CAGE_peak_2_at_UGT1A6_5end | |||
|id=chr2:234601527..234601551,+ | |||
|ontology_enrichment_celltype=CL:0000223!8.90e-14!59;CL:0000066!2.40e-12!254;CL:0002178!1.73e-08!3;CL:0000181!3.34e-08!12;CL:0000417!3.34e-08!12;CL:0000668!3.34e-08!12;CL:0000414!3.34e-08!12;CL:0000412!3.34e-08!12;CL:0000182!3.34e-08!12;CL:0002076!6.24e-08!43;CL:0000159!9.08e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000159;1.86e-10;2!CL:0000182;3.65e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.95e-10,2;CL:0000182,3.51e-10,12;CL:0000066,1.10e-09,253;CL:0000223,1.20e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.96e-09;31!UBERON:0003918;3.32e-08;10!UBERON:0007687;3.32e-08;10!UBERON:0001041;4.95e-07;30!CL:0000223;6.21e-07;58 | |||
|ontology_enrichment_disease=DOID:305!6.62e-17!106;DOID:299!3.07e-16!25;DOID:0050687!1.75e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:299;2.04e-17;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.89e-17,25;DOID:305,1.60e-13,106;DOID:0050687,4.67e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.22e-15!169;UBERON:0000925!1.22e-15!169;UBERON:0006595!1.22e-15!169;UBERON:0001007!1.54e-13!155;UBERON:0001555!1.54e-13!155;UBERON:0007026!1.54e-13!155;UBERON:0004921!2.17e-13!129;UBERON:0004185!2.17e-13!129;UBERON:0005911!2.60e-12!82;UBERON:0005172!3.55e-12!55;UBERON:0005173!3.55e-12!55;UBERON:0001008!3.94e-12!45;UBERON:0009497!9.54e-12!25;UBERON:0000015!9.54e-12!25;UBERON:0002423!9.54e-12!25;UBERON:0006235!9.54e-12!25;UBERON:0004161!9.54e-12!25;UBERON:0000077!3.00e-11!130;UBERON:0005177!7.04e-11!107;UBERON:0006554!7.95e-11!44;UBERON:0002417!1.57e-10!61;UBERON:0000916!1.57e-10!61;UBERON:0003929!9.96e-10!54;UBERON:0002110!6.75e-09!3;UBERON:0006242!6.75e-09!3;UBERON:0000466!2.50e-07!126;UBERON:0008835!2.55e-07!22;UBERON:0003894!2.55e-07!22;UBERON:0009569!2.85e-07!113;UBERON:0003104!3.73e-07!238;UBERON:0009142!3.73e-07!238;UBERON:0009854!6.14e-07!23;UBERON:0000489!7.66e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.36e-11;25!UBERON:0006554;3.67e-09;30!UBERON:0001008;3.67e-09;30!UBERON:0002107;6.68e-09;19!UBERON:0006925;6.68e-09;19!UBERON:0005172;9.40e-08;52!UBERON:0005173;9.40e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.91e-13,82;UBERON:0004921,6.22e-13,118;UBERON:0004119,1.10e-11,160;UBERON:0000925,1.10e-11,160;UBERON:0006595,1.10e-11,160;UBERON:0009497,1.32e-11,25;UBERON:0000015,1.32e-11,25;UBERON:0002423,1.32e-11,25;UBERON:0006235,1.32e-11,25;UBERON:0004161,1.32e-11,25;UBERON:0001007,7.11e-11,145;UBERON:0001555,7.11e-11,145;UBERON:0007026,7.11e-11,145;UBERON:0005172,1.06e-10,54;UBERON:0005173,1.06e-10,54;UBERON:0003929,1.07e-10,54;UBERON:0008835,2.68e-10,22;UBERON:0003894,2.68e-10,22;UBERON:0005177,4.63e-10,101;UBERON:0001008,5.50e-10,48;UBERON:0009854,8.28e-10,23;UBERON:0002417,2.18e-09,60;UBERON:0000916,2.18e-09,60;UBERON:0007499,6.04e-09,25;UBERON:0002107,6.50e-09,19;UBERON:0006925,6.50e-09,19;UBERON:0008836,6.50e-09,19;UBERON:0009856,1.45e-08,26;UBERON:0006554,1.92e-08,47;UBERON:0009569,1.45e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35248516163906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.5046649733873,45.2100519671708,46.6724026278309,0,58.0505429923496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5031339509947,0.802025881213139,0,0,0,0,0,0.231046011313244,0,0,1.26661954671451,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,35.5491490184642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7976244788637,5.59656984472599,0,0,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7255567477589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,213.21421903865,0,7.29961201713309,0,0,2.90799823828566,0,0,0,0,0,1.70690172428249,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,3.10142335502381,3.8165329287164,0,0,0.530745387020035,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,218.010912258821,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,28.746053262016,0.240476460754601,0.85381197895741,0.19980960958213,5.76361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,203.843314217045,0,0,0,0,0,0,0,0,0,0.335434687599266,204.185587612222,25.5453844217441,0,0,0,0,0,0,0,0,0,0,0,0,0,63.7502216499659,0,0,0,4.10608410922391,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,71.4913836860371,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707818340086442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29972369751271,0,0,0,0,0,0,1.71488009437418,0,0.0657727735628491,0,0,2.51177897121645,0,0,0,62.4030738621816,6.6885236304187,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0,29.9772557218083,0.098150233615243,244.689275439415,0,0,0,0,0,0,0,1.01651473835064,0,0,2.08370226891451,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,2.438554983351,0,0.89543595472072,0,0,0.359300808426348,0,0.122241444182866,0,2.66302709674205,0,0 | |||
|short_description=p2@UGT1A6 | |||
}} |
Latest revision as of 23:30, 15 September 2015
Short description: | p2@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UGT1A6_5end |
Coexpression cluster: | C1504_signet_endometrial_bile_hepatoma_kidney_mesothelioma_liver |
Association with transcript: | 15bp_to_ENST00000305139, NM_001072, uc002vuv.3, uc010zmy.1_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | P19224Q5DSZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.95e-10 | 2 |
hepatocyte | 3.51e-10 | 12 |
epithelial cell | 1.10e-09 | 253 |
endodermal cell | 1.20e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.91e-13 | 82 |
subdivision of digestive tract | 6.22e-13 | 118 |
endoderm-derived structure | 1.10e-11 | 160 |
endoderm | 1.10e-11 | 160 |
presumptive endoderm | 1.10e-11 | 160 |
epithelium of foregut-midgut junction | 1.32e-11 | 25 |
anatomical boundary | 1.32e-11 | 25 |
hepatobiliary system | 1.32e-11 | 25 |
foregut-midgut junction | 1.32e-11 | 25 |
septum transversum | 1.32e-11 | 25 |
digestive system | 7.11e-11 | 145 |
digestive tract | 7.11e-11 | 145 |
primitive gut | 7.11e-11 | 145 |
abdomen element | 1.06e-10 | 54 |
abdominal segment element | 1.06e-10 | 54 |
gut epithelium | 1.07e-10 | 54 |
hepatic diverticulum | 2.68e-10 | 22 |
liver primordium | 2.68e-10 | 22 |
trunk region element | 4.63e-10 | 101 |
renal system | 5.50e-10 | 48 |
digestive tract diverticulum | 8.28e-10 | 23 |
abdominal segment of trunk | 2.18e-09 | 60 |
abdomen | 2.18e-09 | 60 |
epithelial sac | 6.04e-09 | 25 |
liver | 6.50e-09 | 19 |
digestive gland | 6.50e-09 | 19 |
liver bud | 6.50e-09 | 19 |
sac | 1.45e-08 | 26 |
urinary system structure | 1.92e-08 | 47 |
subdivision of trunk | 1.45e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.89e-17 | 25 |
carcinoma | 1.60e-13 | 106 |
cell type cancer | 4.67e-10 | 143 |