FFCP PHASE1:Hg19::chr2:234600370..234600381,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCT4 | |UniProt=B5MCT4 | ||
|association_with_transcript=14bp_to_ENST00000446481_5end | |association_with_transcript=14bp_to_ENST00000446481_5end | ||
|cluster_id=chr2:234600370..234600381,+ | |||
|coexpression_cluster_id=C1898 | |coexpression_cluster_id=C1898 | ||
|description=CAGE_peak_5_at_UGT1A6_5end | |description=CAGE_peak_5_at_UGT1A6_5end | ||
|id=chr2:234600370..234600381,+ | |id=chr2:234600370..234600381,+ | ||
|ontology_enrichment_celltype=CL:0000244;3.70e-22;4!CL:0000731;3.70e-22;4!CL:0002076;3.85e-10;42!CL:1001319;4.69e-07;1!CL:1000600;4.69e-07;1!CL:0002368;7.38e-07;13 | |ontology_enrichment_celltype=CL:0000066!6.73e-26!254;CL:0002076!2.64e-23!43;CL:0000223!6.10e-20!59;CL:0002251!8.49e-15!21;CL:0000076!1.07e-11!62;CL:0000244!2.82e-10!4;CL:0000731!2.82e-10!4;CL:0002368!1.01e-07!13;CL:0002159!1.34e-07!13;CL:0002231!4.00e-07!3;CL:0000362!6.06e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000244;3.70e-22;4!CL:0000731;3.70e-22;4!CL:0002076;3.85e-10;42!CL:1001319;4.69e-07;1!CL:1000600;4.69e-07;1!CL:0002368;7.38e-07;13 | ||
|ontology_enrichment_disease=DOID:1749;7.05e-31;14!DOID:5662;3.72e-07;1!DOID:3151;7.82e-07;1!DOID:3149;7.82e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000244,2.39e-22,4;CL:0000731,2.39e-22,4;CL:0000066,1.06e-18,253;CL:0000076,5.57e-12,63;CL:0002076,3.32e-11,42;CL:0000223,2.35e-09,58;CL:1001319,4.69e-07,1;CL:1000600,4.69e-07,1;CL:0002368,8.37e-07,13 | ||
|ontology_enrichment_uberon=UBERON:0000365;1.73e-27;5!UBERON:0005910;6.95e-23;6!UBERON:0000486;2.43e-11;12!UBERON:0005911;9.39e-09;36!UBERON:0000997;4.18e-07;1!UBERON:0005056;4.18e-07;1!UBERON:0004176;4.18e-07;1!UBERON:0004645;4.69e-07;1!UBERON:0001256;4.69e-07;1!UBERON:0001259;4.69e-07;1 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!7.90e-22!14;DOID:305!3.42e-13!106;DOID:0050687!9.93e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.05e-31;14!DOID:5662;3.72e-07;1!DOID:3151;7.82e-07;1!DOID:3149;7.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.73e-31,14;DOID:305,8.59e-15,106;DOID:0050687,6.71e-10,143;DOID:5662,3.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.12e-17!169;UBERON:0000925!1.12e-17!169;UBERON:0006595!1.12e-17!169;UBERON:0000365!1.68e-12!5;UBERON:0001004!8.51e-12!72;UBERON:0000161!1.96e-11!35;UBERON:0003729!4.06e-11!5;UBERON:0001007!4.38e-11!155;UBERON:0001555!4.38e-11!155;UBERON:0007026!4.38e-11!155;UBERON:0000344!7.52e-11!12;UBERON:0005910!2.53e-10!6;UBERON:0003343!2.70e-09!4;UBERON:0004785!2.70e-09!4;UBERON:0000065!1.39e-08!53;UBERON:0000077!3.15e-08!130;UBERON:0004921!3.29e-08!129;UBERON:0004185!3.29e-08!129;UBERON:0005911!3.68e-08!82;UBERON:0000166!4.09e-08!21;UBERON:0006554!2.81e-07!44;UBERON:0000974!3.97e-07!10;UBERON:0001008!4.85e-07!45;UBERON:0000165!7.52e-07!28;UBERON:0000930!7.52e-07!28;UBERON:0001723!9.30e-07!3;UBERON:0001033!9.30e-07!3;UBERON:0010056!9.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.73e-27;5!UBERON:0005910;6.95e-23;6!UBERON:0000486;2.43e-11;12!UBERON:0005911;9.39e-09;36!UBERON:0000997;4.18e-07;1!UBERON:0005056;4.18e-07;1!UBERON:0004176;4.18e-07;1!UBERON:0004645;4.69e-07;1!UBERON:0001256;4.69e-07;1!UBERON:0001259;4.69e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.12e-27,5;UBERON:0005910,4.84e-23,6;UBERON:0004119,1.07e-11,160;UBERON:0000925,1.07e-11,160;UBERON:0006595,1.07e-11,160;UBERON:0005911,1.02e-08,82;UBERON:0000997,4.18e-07,1;UBERON:0005056,4.18e-07,1;UBERON:0004645,4.69e-07,1;UBERON:0001256,4.69e-07,1;UBERON:0001259,4.69e-07,1 | |||
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| ||
|short_description=p5@UGT1A6 | |short_description=p5@UGT1A6 | ||
}} | }} |
Latest revision as of 23:30, 15 September 2015
Short description: | p5@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UGT1A6_5end |
Coexpression cluster: | C1898_oral_lung_pharyngeal_bronchial_pleomorphic_squamous_Urothelial |
Association with transcript: | 14bp_to_ENST00000446481_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | B5MCT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.39e-22 | 4 |
urothelial cell | 2.39e-22 | 4 |
epithelial cell | 1.06e-18 | 253 |
squamous epithelial cell | 5.57e-12 | 63 |
endo-epithelial cell | 3.32e-11 | 42 |
endodermal cell | 2.35e-09 | 58 |
bladder cell | 4.69e-07 | 1 |
lower urinary tract cell | 4.69e-07 | 1 |
respiratory epithelial cell | 8.37e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.12e-27 | 5 |
transitional epithelium | 4.84e-23 | 6 |
endoderm-derived structure | 1.07e-11 | 160 |
endoderm | 1.07e-11 | 160 |
presumptive endoderm | 1.07e-11 | 160 |
endo-epithelium | 1.02e-08 | 82 |
mammalian vulva | 4.18e-07 | 1 |
external female genitalia | 4.18e-07 | 1 |
urinary bladder urothelium | 4.69e-07 | 1 |
wall of urinary bladder | 4.69e-07 | 1 |
mucosa of urinary bladder | 4.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.73e-31 | 14 |
carcinoma | 8.59e-15 | 106 |
cell type cancer | 6.71e-10 | 143 |
pleomorphic carcinoma | 3.73e-07 | 1 |