FFCP PHASE1:Hg19::chr2:101618729..101618761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6160 | |EntrezGene=6160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10334 | |HGNC=10334 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4K2,B7Z4C8,Q6IRZ0,B7Z4E3,P62899 | |UniProt=B7Z4K2,B7Z4C8,Q6IRZ0,B7Z4E3,P62899 | ||
|association_with_transcript=0bp_to_ENST00000409028,ENST00000409038,ENST00000409320,ENST00000409650,ENST00000409733_5end | |association_with_transcript=0bp_to_ENST00000409028,ENST00000409038,ENST00000409320,ENST00000409650,ENST00000409733_5end | ||
|cluster_id=chr2:101618729..101618761,+ | |||
|coexpression_cluster_id=C3953 | |||
|description=CAGE_peak_1_at_RPL31_5end | |description=CAGE_peak_1_at_RPL31_5end | ||
|id=chr2:101618729..101618761,+ | |id=chr2:101618729..101618761,+ | ||
|ontology_enrichment_celltype=CL:0000003!1.71e-19!722;CL:0000012!2.27e-15!682;CL:0000548!6.00e-14!679;CL:0000004!6.00e-14!679;CL:0000255!6.00e-14!679;CL:0000144!1.14e-11!625;CL:0000034!2.76e-10!444;CL:0000048!8.73e-10!430;CL:0002057!1.12e-09!42;CL:0002371!2.57e-09!591;CL:0000723!4.86e-09!436;CL:0000860!7.21e-09!45;CL:0002320!2.87e-08!365;CL:0000063!1.59e-07!578;CL:0000134!2.03e-07!358;CL:0002087!4.60e-07!119;CL:0002031!5.93e-07!124 | |ontology_enrichment_celltype=CL:0000003!1.71e-19!722;CL:0000012!2.27e-15!682;CL:0000548!6.00e-14!679;CL:0000004!6.00e-14!679;CL:0000255!6.00e-14!679;CL:0000144!1.14e-11!625;CL:0000034!2.76e-10!444;CL:0000048!8.73e-10!430;CL:0002057!1.12e-09!42;CL:0002371!2.57e-09!591;CL:0000723!4.86e-09!436;CL:0000860!7.21e-09!45;CL:0002320!2.87e-08!365;CL:0000063!1.59e-07!578;CL:0000134!2.03e-07!358;CL:0002087!4.60e-07!119;CL:0002031!5.93e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-08;33!CL:0002057;1.42e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.06e-10,441;CL:0000048,6.50e-10,427;CL:0000860,1.12e-09,42;CL:0002057,1.12e-09,42;CL:0000723,3.68e-09,433;CL:0002320,2.90e-08,361;CL:0002087,1.80e-07,115;CL:0000134,2.04e-07,354;CL:0002031,2.42e-07,120;CL:0000473,4.15e-07,48;CL:0000234,4.15e-07,48;CL:0002032,5.09e-07,161;CL:0000837,5.09e-07,161;CL:0000037,7.54e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.85e-08!375 | |ontology_enrichment_uberon=UBERON:0002384!3.85e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.92e-08,371 | |||
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| ||
|short_description=p1@RPL31 | |short_description=p1@RPL31 | ||
}} | }} |
Latest revision as of 23:24, 15 September 2015
Short description: | p1@RPL31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL31_5end |
Coexpression cluster: | C3953_Smooth_CD4_Hair_acute_iPS_xeroderma_Nucleus |
Association with transcript: | 0bp_to_ENST00000409028, ENST00000409038, ENST00000409320, ENST00000409650, ENST00000409733_5end |
EntrezGene: | RPL31 |
HGNC: | 10334 |
UniProt: | B7Z4K2B7Z4C8Q6IRZ0B7Z4E3P62899 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.06e-10 | 441 |
multi fate stem cell | 6.50e-10 | 427 |
classical monocyte | 1.12e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-09 | 42 |
somatic stem cell | 3.68e-09 | 433 |
connective tissue cell | 2.90e-08 | 361 |
nongranular leukocyte | 1.80e-07 | 115 |
mesenchymal cell | 2.04e-07 | 354 |
hematopoietic lineage restricted progenitor cell | 2.42e-07 | 120 |
defensive cell | 4.15e-07 | 48 |
phagocyte | 4.15e-07 | 48 |
hematopoietic oligopotent progenitor cell | 5.09e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.09e-07 | 161 |
hematopoietic stem cell | 7.54e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.92e-08 | 371 |