FFCP PHASE1:Hg19::chr2:101591314..101591333,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:101591314..101591333,+ to FFCP PHASE1:Hg19::chr2:101591314..101591333,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4862 | |EntrezGene=4862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7895 | |HGNC=7895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000450763_5end | |||
|cluster_id=chr2:101591314..101591333,+ | |||
|description=CAGE_peak_2_at_NPAS2_5end | |||
|id=chr2:101591314..101591333,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002559;7.09e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,3.30e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.51e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.05e-13;14!DOID:120;6.01e-09;27!DOID:193;4.70e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.24e-12,14;DOID:120,1.03e-08,27;DOID:193,7.65e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.33e-14!347;UBERON:0000477!2.43e-12!286;UBERON:0000119!3.04e-12!312;UBERON:0000483!5.84e-12!309;UBERON:0000475!6.32e-12!365;UBERON:0004111!2.52e-10!241;UBERON:0000468!6.28e-10!659;UBERON:0000922!1.10e-09!612;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!2.32e-09!604;UBERON:0005291!2.32e-09!604;UBERON:0006598!2.32e-09!604;UBERON:0002532!2.32e-09!604;UBERON:0000467!2.79e-09!625;UBERON:0000480!4.14e-09!626;UBERON:0000025!4.98e-08!194;UBERON:0002020!2.38e-07!34;UBERON:0003528!2.38e-07!34;UBERON:0002780!4.50e-07!41;UBERON:0001890!4.50e-07!41;UBERON:0006240!4.50e-07!41;UBERON:0002619!5.58e-07!22;UBERON:0001869!5.62e-07!32;UBERON:0002791!7.03e-07!33;UBERON:0001893!9.79e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.97e-08;15!UBERON:0007376;5.97e-08;15!UBERON:0002073;7.09e-08;5!UBERON:0002118;4.78e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,3.22e-08,15;UBERON:0007376,3.22e-08,15;UBERON:0007383,3.22e-08,15;UBERON:0002073,3.30e-08,5;UBERON:0005086,3.30e-08,5;UBERON:0002118,9.01e-07,5 | |||
|phase1_expression=0.363356758541113,1.92690471501885,1.12763523276777,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,1.89515962028049,0,0.491467873003018,0.697801167972428,0.873765488520689,0.527533956456907,0.618831764800233,1.32558950291166,6.05092631806598,3.01347264011988,1.46062018077475,2.92759679274304,0.123121058076788,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0,1.44846518960824,0,1.94653948121054,0,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0,2.09749718104953,1.6507082516404,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.112611480483322,3.06633274931766,0.949265659568129,0.366403487860815,0,0,1.3082821564276,0,1.13967460498122,0.264818361626438,0,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0.67355336034844,0.653847612453835,0,0,0.468642863667593,0.312160076830321,0,0.448346041655403,0.469737994575059,0.809364721840658,0.421352420106746,0,0.859840221182376,0.619954687054593,1.18800285728205,1.23633464639278,0,1.43723628363248,0.505008341862199,1.00094815897571,0.277064115484183,0.877955241761676,0.30648779579902,0,0.340296549480063,0,0,0.635795703478686,0,0.618315175430633,0,0.18611685633159,0,0,0.504867548488229,0.368199594569197,0.161646056818812,0,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,1.56449532329816,1.92972281457866,4.14404764057442,2.78620756819187,2.16563844500876,0.828147600278907,0.842923450390509,0.482022059766964,0.661763836394364,0,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0,1.40241773803446,0,0,0,1.96565443335525,0,2.20731549707325,0.491953754172454,0.514703430895577,1.09750285408626,1.1240175325762,0.301586917234893,0.555530670951178,0,0,1.44331342025273,0,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0.600686115687835,0.285826432630578,0.448524337381443,0.43596006883328,0.2933531432838,0.646358578788889,7.15312891703765,0,0.531876233169741,0,0.771622122786426,1.41849132023278,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,2.41151501647669,0.871533458600294,0.799783929456456,0,0,0,0.718874566474748,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0.981531933753119,0.500170521059677,1.89885516589815,0.415941723061614,1.60586089917446,0.630809660135739,0.468565659970853,0.300946099727719,2.27407504055985,0,0,0,0.868836144680828,0.979005787313703,0.686286847621712,0,0,0,0,1.66435439510497,0.604780586659361,0.248107807818777,0.61384789315225,0.280660094433074,1.28139149255701,0,1.93024705372329,1.48418066444991,2.7757744884478,1.59805552781814,0.0821271560138091,7.2695620085707,0.697262270759755,0.120859449591622,7.81975234182811,2.4861867012692,0.918515585316854,2.00300284807389,0.786746489756545,0.902399225814824,0.385076685522074,0,0,0.316654886678627,0,0.510281115829547,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0,0,1.95018073810956,3.21367859688319,0.580024309752732,0,0.15350367472613,0.275673144969061,0.322260734604821,0.725083469571143,0.340906509664404,0.534192213880424,0.330569830721956,0.768760269460425,0.127612712494584,0.910420027699949,8.36721988735114,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0.316379424718726,1.14378116354295,1.02359116524534,0,0.318203247925937,0.78494864019923,0.539617372749944,1.09814811894422,0.353437207037059,0,0,0.842516912477962,0,1.46228093778771,1.05650146756755,0.409499734223957,2.54529777516683,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0,0.608731130888112,0.92947049429925,0.845086807596724,0.286822704408103,0.196498082026242,0.35667105148125,0,1.26664581178598,1.64647446479951,0,0.699869440489966,0.192444225451024,0,0,0,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0.568272293612826,0.47748896947538,0.296964680832639,0,1.9882952955326,1.68803299692615,2.22617410045812,0,0,0.796991953004279,0,0,0.409074730008619,0,1.55519793830904,0,1.25314822272926,0,0.295930216910801,0,0,2.90799823828566,0.371072392647405,0,0,0,0,0.227586896570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| ||
|short_description=p2@NPAS2 | |||
}} | }} |
Latest revision as of 23:24, 15 September 2015
Short description: | p2@NPAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450763_5end |
EntrezGene: | NPAS2 |
HGNC: | 7895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 3.30e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 3.22e-08 | 15 |
outer epithelium | 3.22e-08 | 15 |
enveloping layer of ectoderm | 3.22e-08 | 15 |
hair follicle | 3.30e-08 | 5 |
hair follicle placode | 3.30e-08 | 5 |
right ovary | 9.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.24e-12 | 14 |
female reproductive organ cancer | 1.03e-08 | 27 |
reproductive organ cancer | 7.65e-08 | 29 |