FFCP PHASE1:Hg19::chr5:147469981..147469987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11005 | |EntrezGene=11005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15464 | |HGNC=15464 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-228bp_to_ENST00000481286_5end | |association_with_transcript=-228bp_to_ENST00000481286_5end | ||
|cluster_id=chr5:147469981..147469987,+ | |||
|coexpression_cluster_id=C2810 | |coexpression_cluster_id=C2810 | ||
|description=CAGE_peak_8_at_SPINK5_5end | |description=CAGE_peak_8_at_SPINK5_5end | ||
|id=chr5:147469981..147469987,+ | |id=chr5:147469981..147469987,+ | ||
|ontology_enrichment_celltype=CL:0002159!4.52e-18!13;CL:0002150!1.24e-16!3;CL:0000861!1.24e-16!3;CL:0002166!6.34e-16!3;CL:0002621!7.75e-16!3;CL:0002076!3.07e-14!43;CL:0000240!1.46e-13!6;CL:0000311!1.46e-13!6;CL:0000079!1.46e-13!6;CL:0000237!1.46e-13!6;CL:0000036!1.46e-13!6;CL:0000357!1.46e-13!6;CL:0000114!1.46e-13!6;CL:0000223!1.43e-11!59;CL:0002251!8.64e-11!21;CL:0000312!1.53e-09!5;CL:0000066!1.32e-07!254 | |ontology_enrichment_celltype=CL:0002159!4.52e-18!13;CL:0002150!1.24e-16!3;CL:0000861!1.24e-16!3;CL:0002166!6.34e-16!3;CL:0002621!7.75e-16!3;CL:0002076!3.07e-14!43;CL:0000240!1.46e-13!6;CL:0000311!1.46e-13!6;CL:0000079!1.46e-13!6;CL:0000237!1.46e-13!6;CL:0000036!1.46e-13!6;CL:0000357!1.46e-13!6;CL:0000114!1.46e-13!6;CL:0000223!1.43e-11!59;CL:0002251!8.64e-11!21;CL:0000312!1.53e-09!5;CL:0000066!1.32e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.63e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001949!7.75e-16!3;UBERON:0001708!4.55e-12!4;UBERON:0001704!4.55e-12!4;UBERON:0003127!7.83e-11!2;UBERON:0001004!6.66e-09!72;UBERON:0002090!3.43e-08!6;UBERON:0000166!5.26e-08!21;UBERON:0000002!6.59e-08!6;UBERON:0001560!6.59e-08!6;UBERON:0000165!7.46e-08!28;UBERON:0000930!7.46e-08!28;UBERON:0000161!8.82e-08!35;UBERON:0004119!3.96e-07!169;UBERON:0000925!3.96e-07!169;UBERON:0006595!3.96e-07!169;UBERON:0003126!6.08e-07!7;UBERON:0001005!6.08e-07!7 | |ontology_enrichment_uberon=UBERON:0001949!7.75e-16!3;UBERON:0001708!4.55e-12!4;UBERON:0001704!4.55e-12!4;UBERON:0003127!7.83e-11!2;UBERON:0001004!6.66e-09!72;UBERON:0002090!3.43e-08!6;UBERON:0000166!5.26e-08!21;UBERON:0000002!6.59e-08!6;UBERON:0001560!6.59e-08!6;UBERON:0000165!7.46e-08!28;UBERON:0000930!7.46e-08!28;UBERON:0000161!8.82e-08!35;UBERON:0004119!3.96e-07!169;UBERON:0000925!3.96e-07!169;UBERON:0006595!3.96e-07!169;UBERON:0003126!6.08e-07!7;UBERON:0001005!6.08e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;5.73e-08;6!UBERON:0001560;5.73e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6 | |||
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|short_description=p8@SPINK5 | |short_description=p8@SPINK5 | ||
}} | }} |
Latest revision as of 23:17, 15 September 2015
Short description: | p8@SPINK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPINK5_5end |
Coexpression cluster: | C2810_cervical_epitheloid_anaplastic_ductal_Small_gall_esophagus |
Association with transcript: | -228bp_to_ENST00000481286_5end |
EntrezGene: | SPINK5 |
HGNC: | 15464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |