FFCP PHASE1:Hg19::chr16:2816324..2816464,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr16:2816324..2816464,+ to FFCP PHASE1:Hg19::chr16:2816324..2816464,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23524 | |EntrezGene=23524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16639 | |HGNC=16639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_BC028054_5end | |||
|cluster_id=chr16:2816324..2816464,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_SRRM2_5end | |||
|id=chr16:2816324..2816464,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.66e-08!42;CL:0002087!1.30e-07!119;CL:0000738!3.46e-07!140;CL:0000860!6.22e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-07;33!CL:0002057;1.76e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.95e-08,115;CL:0000860,7.55e-08,42;CL:0002057,7.55e-08,42;CL:0000738,1.24e-07,136;CL:0000473,2.27e-07,48;CL:0000234,2.27e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SRRM2 | |||
}} | }} |
Latest revision as of 23:16, 15 September 2015
Short description: | p3@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRRM2_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -39bp_to_BC028054_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.95e-08 | 115 |
classical monocyte | 7.55e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.55e-08 | 42 |
leukocyte | 1.24e-07 | 136 |
defensive cell | 2.27e-07 | 48 |
phagocyte | 2.27e-07 | 48 |