FFCP PHASE1:Hg19::chr1:110453203..110453255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1435 | |EntrezGene=1435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2432 | |HGNC=2432 | ||
|TSSclassifier=strong | |||
|UniProt=P09603 | |UniProt=P09603 | ||
|association_with_transcript=0bp_to_ENST00000329608,ENST00000344188,ENST00000357302,NM_000757,NM_172210,NM_172212,uc001dyt.2,uc001dyu.2,uc001dyv.3,uc001dyw.3_5end | |association_with_transcript=0bp_to_ENST00000329608,ENST00000344188,ENST00000357302,NM_000757,NM_172210,NM_172212,uc001dyt.2,uc001dyu.2,uc001dyv.3,uc001dyw.3_5end | ||
|cluster_id=chr1:110453203..110453255,+ | |||
|description=CAGE_peak_3_at_CSF1_5end | |description=CAGE_peak_3_at_CSF1_5end | ||
|id=chr1:110453203..110453255,+ | |id=chr1:110453203..110453255,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.34e-12!119;CL:0000055!1.22e-10!180;CL:0000057!1.62e-10!75;CL:0000213!3.68e-07!57;CL:0000215!3.68e-07!57 | |ontology_enrichment_celltype=CL:0000222!5.34e-12!119;CL:0000055!1.22e-10!180;CL:0000057!1.62e-10!75;CL:0000213!3.68e-07!57;CL:0000215!3.68e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.73e-12,121;CL:0000057,7.76e-10,76;CL:0000048,3.58e-09,427;CL:0000723,2.26e-08,433;CL:0000034,8.74e-08,441;CL:0000213,8.86e-08,58;CL:0000215,8.86e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.36e-12!69;UBERON:0002049!2.78e-11!79;UBERON:0007798!2.78e-11!79;UBERON:0001009!1.04e-10!113;UBERON:0004535!2.37e-10!110;UBERON:0004872!1.19e-09!84;UBERON:0001981!1.75e-09!60;UBERON:0007500!1.75e-09!60;UBERON:0004537!1.75e-09!60;UBERON:0006965!1.75e-09!60;UBERON:0003914!1.45e-08!118;UBERON:0001637!6.07e-07!42;UBERON:0003509!6.07e-07!42;UBERON:0004572!6.07e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.14e-13,68;UBERON:0002049,3.14e-11,78;UBERON:0007798,3.14e-11,78;UBERON:0007500,3.53e-10,59;UBERON:0001981,3.53e-10,59;UBERON:0004537,3.53e-10,59;UBERON:0006965,3.53e-10,59;UBERON:0004872,6.08e-10,83;UBERON:0001009,7.77e-10,112;UBERON:0004535,1.56e-09,109;UBERON:0003914,6.24e-09,117;UBERON:0000926,3.91e-08,315;UBERON:0004120,3.91e-08,315;UBERON:0006603,3.91e-08,315;UBERON:0001637,4.21e-07,42;UBERON:0003509,4.21e-07,42;UBERON:0004572,4.21e-07,42 | |||
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| ||
|short_description=p3@CSF1 | |short_description=p3@CSF1 | ||
}} | }} |
Latest revision as of 23:11, 15 September 2015
Short description: | p3@CSF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329608, ENST00000344188, ENST00000357302, NM_000757, NM_172210, NM_172212, uc001dyt.2, uc001dyu.2, uc001dyv.3, uc001dyw.3_5end |
EntrezGene: | CSF1 |
HGNC: | 2432 |
UniProt: | P09603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.73e-12 | 121 |
fibroblast | 7.76e-10 | 76 |
multi fate stem cell | 3.58e-09 | 427 |
somatic stem cell | 2.26e-08 | 433 |
stem cell | 8.74e-08 | 441 |
lining cell | 8.86e-08 | 58 |
barrier cell | 8.86e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.14e-13 | 68 |
vasculature | 3.14e-11 | 78 |
vascular system | 3.14e-11 | 78 |
epithelial tube open at both ends | 3.53e-10 | 59 |
blood vessel | 3.53e-10 | 59 |
blood vasculature | 3.53e-10 | 59 |
vascular cord | 3.53e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 6.08e-10 | 83 |
circulatory system | 7.77e-10 | 112 |
cardiovascular system | 1.56e-09 | 109 |
epithelial tube | 6.24e-09 | 117 |
mesoderm | 3.91e-08 | 315 |
mesoderm-derived structure | 3.91e-08 | 315 |
presumptive mesoderm | 3.91e-08 | 315 |
artery | 4.21e-07 | 42 |
arterial blood vessel | 4.21e-07 | 42 |
arterial system | 4.21e-07 | 42 |