FFCP PHASE1:Hg19::chrX:51639562..51639637,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6813 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5V3 | |||
|association_with_transcript=-19bp_to_AL133628_5end | |||
|cluster_id=chrX:51639562..51639637,+ | |||
|description=CAGE_peak_6_at_MAGED1_5end | |||
|id=chrX:51639562..51639637,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.15e-22!180;CL:0000183!7.36e-13!59;CL:0000057!6.86e-12!75;CL:0000680!1.15e-11!57;CL:0000056!1.15e-11!57;CL:0000355!1.15e-11!57;CL:0000187!5.46e-11!54;CL:0000393!2.18e-10!60;CL:0000211!2.18e-10!60;CL:0000222!1.30e-09!119;CL:0000192!1.58e-09!42;CL:0000514!1.58e-09!42;CL:0002321!2.93e-08!248;CL:0000220!6.11e-08!246;CL:0000359!2.14e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000723;1.95e-07;61!CL:0000134;2.16e-07;55!CL:0002334;2.36e-07;12!CL:0000187;5.05e-07;55!CL:0000048;5.27e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.78e-11,58;CL:0000056,1.78e-11,58;CL:0000355,1.78e-11,58;CL:0000187,4.30e-11,55;CL:0000057,1.06e-10,76;CL:0000393,6.06e-10,61;CL:0000211,6.06e-10,61;CL:0000192,3.42e-09,43;CL:0000514,3.42e-09,43;CL:0000222,8.54e-08,121;CL:0002334,9.24e-08,12;CL:0000359,4.92e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.05e-15!365;UBERON:0004290!9.75e-13!70;UBERON:0000119!1.19e-12!312;UBERON:0000483!1.72e-12!309;UBERON:0000914!1.04e-11!83;UBERON:0002329!1.04e-11!83;UBERON:0003077!1.04e-11!83;UBERON:0003059!1.04e-11!83;UBERON:0007282!1.04e-11!83;UBERON:0009618!1.04e-11!83;UBERON:0007285!1.04e-11!83;UBERON:0000486!1.07e-11!82;UBERON:0005256!1.22e-11!143;UBERON:0001134!2.80e-11!61;UBERON:0002036!2.80e-11!61;UBERON:0003082!2.80e-11!61;UBERON:0002385!2.46e-10!63;UBERON:0001015!2.46e-10!63;UBERON:0000383!2.46e-10!63;UBERON:0000481!3.71e-10!347;UBERON:0002100!5.10e-09!216;UBERON:0000490!1.43e-08!138;UBERON:0001637!3.00e-08!42;UBERON:0003509!3.00e-08!42;UBERON:0004572!3.00e-08!42;UBERON:0004872!7.44e-08!84;UBERON:0000477!1.10e-07!286;UBERON:0003914!2.38e-07!118;UBERON:0004111!4.04e-07!241 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.69e-14,78;UBERON:0007524,2.07e-12,73;UBERON:0002329,3.34e-12,71;UBERON:0003059,3.34e-12,71;UBERON:0007282,3.34e-12,71;UBERON:0004290,3.34e-12,71;UBERON:0009618,3.34e-12,71;UBERON:0005256,5.71e-12,122;UBERON:0003077,8.31e-12,72;UBERON:0007285,8.31e-12,72;UBERON:0001134,7.64e-11,62;UBERON:0002036,7.64e-11,62;UBERON:0003082,7.64e-11,62;UBERON:0000486,1.04e-10,83;UBERON:0002385,4.55e-10,64;UBERON:0001015,4.55e-10,64;UBERON:0000383,4.55e-10,64;UBERON:0003104,1.04e-09,160;UBERON:0009142,1.04e-09,160;UBERON:0000490,3.49e-09,148;UBERON:0001637,4.31e-09,42;UBERON:0003509,4.31e-09,42;UBERON:0004572,4.31e-09,42;UBERON:0004872,2.08e-08,83;UBERON:0000483,2.54e-08,306;UBERON:0000119,3.50e-08,309;UBERON:0003914,3.57e-07,117;UBERON:0002199,9.27e-07,46;UBERON:0002416,9.27e-07,46 | |||
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| |||
|short_description=p6@MAGED1 | |||
}} |
Latest revision as of 23:11, 15 September 2015
Short description: | p6@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAGED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_AL133628_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | Q9Y5V3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.78e-11 | 58 |
myoblast | 1.78e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.78e-11 | 58 |
muscle cell | 4.30e-11 | 55 |
fibroblast | 1.06e-10 | 76 |
electrically responsive cell | 6.06e-10 | 61 |
electrically active cell | 6.06e-10 | 61 |
smooth muscle cell | 3.42e-09 | 43 |
smooth muscle myoblast | 3.42e-09 | 43 |
mesodermal cell | 8.54e-08 | 121 |
preadipocyte | 9.24e-08 | 12 |
vascular associated smooth muscle cell | 4.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.69e-14 | 78 |
dense mesenchyme tissue | 2.07e-12 | 73 |
somite | 3.34e-12 | 71 |
presomitic mesoderm | 3.34e-12 | 71 |
presumptive segmental plate | 3.34e-12 | 71 |
dermomyotome | 3.34e-12 | 71 |
trunk paraxial mesoderm | 3.34e-12 | 71 |
trunk mesenchyme | 5.71e-12 | 122 |
paraxial mesoderm | 8.31e-12 | 72 |
presumptive paraxial mesoderm | 8.31e-12 | 72 |
skeletal muscle tissue | 7.64e-11 | 62 |
striated muscle tissue | 7.64e-11 | 62 |
myotome | 7.64e-11 | 62 |
multilaminar epithelium | 1.04e-10 | 83 |
muscle tissue | 4.55e-10 | 64 |
musculature | 4.55e-10 | 64 |
musculature of body | 4.55e-10 | 64 |
mesenchyme | 1.04e-09 | 160 |
entire embryonic mesenchyme | 1.04e-09 | 160 |
unilaminar epithelium | 3.49e-09 | 148 |
artery | 4.31e-09 | 42 |
arterial blood vessel | 4.31e-09 | 42 |
arterial system | 4.31e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 2.08e-08 | 83 |
epithelium | 2.54e-08 | 306 |
cell layer | 3.50e-08 | 309 |
epithelial tube | 3.57e-07 | 117 |
integument | 9.27e-07 | 46 |
integumental system | 9.27e-07 | 46 |