FFCP PHASE1:Hg19::chrX:51638504..51638519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |EntrezGene=9500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |HGNC=6813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-232bp_to_ENST00000482599_5end | |association_with_transcript=-232bp_to_ENST00000482599_5end | ||
|cluster_id=chrX:51638504..51638519,+ | |||
|coexpression_cluster_id=C4875 | |||
|description=CAGE_peak_5_at_MAGED1_5end | |description=CAGE_peak_5_at_MAGED1_5end | ||
|id=chrX:51638504..51638519,+ | |id=chrX:51638504..51638519,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.08e-21!180;CL:0000057!1.97e-12!75;CL:0000222!3.40e-12!119;CL:0000393!6.79e-11!60;CL:0000211!6.79e-11!60;CL:0000183!1.07e-10!59;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0002321!2.97e-10!248;CL:0000220!6.84e-10!246;CL:0000187!7.62e-10!54;CL:0000192!1.10e-09!42;CL:0000514!1.10e-09!42;CL:0000359!1.50e-07!32 | |ontology_enrichment_celltype=CL:0000055!4.08e-21!180;CL:0000057!1.97e-12!75;CL:0000222!3.40e-12!119;CL:0000393!6.79e-11!60;CL:0000211!6.79e-11!60;CL:0000183!1.07e-10!59;CL:0000680!1.39e-10!57;CL:0000056!1.39e-10!57;CL:0000355!1.39e-10!57;CL:0002321!2.97e-10!248;CL:0000220!6.84e-10!246;CL:0000187!7.62e-10!54;CL:0000192!1.10e-09!42;CL:0000514!1.10e-09!42;CL:0000359!1.50e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.62e-08;32!CL:0000192;2.49e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.29e-10,61;CL:0000211,1.29e-10,61;CL:0000680,1.33e-10,58;CL:0000056,1.33e-10,58;CL:0000355,1.33e-10,58;CL:0000187,7.50e-10,55;CL:0000057,1.24e-09,76;CL:0000192,1.58e-09,43;CL:0000514,1.58e-09,43;CL:0000222,2.14e-08,121;CL:0000359,2.35e-08,32;CL:0002321,2.76e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.49e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.78e-12!83;UBERON:0002329!3.78e-12!83;UBERON:0003077!3.78e-12!83;UBERON:0003059!3.78e-12!83;UBERON:0007282!3.78e-12!83;UBERON:0009618!3.78e-12!83;UBERON:0007285!3.78e-12!83;UBERON:0000119!5.31e-12!312;UBERON:0000483!6.53e-12!309;UBERON:0004290!3.09e-11!70;UBERON:0000475!1.65e-10!365;UBERON:0000486!1.96e-10!82;UBERON:0005256!2.78e-10!143;UBERON:0002049!1.43e-09!79;UBERON:0007798!1.43e-09!79;UBERON:0001134!2.56e-09!61;UBERON:0002036!2.56e-09!61;UBERON:0003082!2.56e-09!61;UBERON:0001637!7.29e-09!42;UBERON:0003509!7.29e-09!42;UBERON:0004572!7.29e-09!42;UBERON:0002385!8.40e-09!63;UBERON:0001015!8.40e-09!63;UBERON:0000383!8.40e-09!63;UBERON:0000490!1.08e-08!138;UBERON:0004872!1.18e-08!84;UBERON:0000468!2.11e-08!659;UBERON:0000481!3.56e-08!347;UBERON:0003914!5.87e-08!118;UBERON:0000477!7.63e-08!286;UBERON:0001981!1.48e-07!60;UBERON:0007500!1.48e-07!60;UBERON:0004537!1.48e-07!60;UBERON:0006965!1.48e-07!60;UBERON:0000055!2.47e-07!69;UBERON:0000025!4.21e-07!194;UBERON:0002100!8.79e-07!216;UBERON:0004111!9.92e-07!241 | |ontology_enrichment_uberon=UBERON:0000914!3.78e-12!83;UBERON:0002329!3.78e-12!83;UBERON:0003077!3.78e-12!83;UBERON:0003059!3.78e-12!83;UBERON:0007282!3.78e-12!83;UBERON:0009618!3.78e-12!83;UBERON:0007285!3.78e-12!83;UBERON:0000119!5.31e-12!312;UBERON:0000483!6.53e-12!309;UBERON:0004290!3.09e-11!70;UBERON:0000475!1.65e-10!365;UBERON:0000486!1.96e-10!82;UBERON:0005256!2.78e-10!143;UBERON:0002049!1.43e-09!79;UBERON:0007798!1.43e-09!79;UBERON:0001134!2.56e-09!61;UBERON:0002036!2.56e-09!61;UBERON:0003082!2.56e-09!61;UBERON:0001637!7.29e-09!42;UBERON:0003509!7.29e-09!42;UBERON:0004572!7.29e-09!42;UBERON:0002385!8.40e-09!63;UBERON:0001015!8.40e-09!63;UBERON:0000383!8.40e-09!63;UBERON:0000490!1.08e-08!138;UBERON:0004872!1.18e-08!84;UBERON:0000468!2.11e-08!659;UBERON:0000481!3.56e-08!347;UBERON:0003914!5.87e-08!118;UBERON:0000477!7.63e-08!286;UBERON:0001981!1.48e-07!60;UBERON:0007500!1.48e-07!60;UBERON:0004537!1.48e-07!60;UBERON:0006965!1.48e-07!60;UBERON:0000055!2.47e-07!69;UBERON:0000025!4.21e-07!194;UBERON:0002100!8.79e-07!216;UBERON:0004111!9.92e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.00e-07;42!UBERON:0003509;4.00e-07;42!UBERON:0004572;4.00e-07;42 | |||
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|phase1_expression=1.09007027562334,2.78330681058278,0.845726424575827,2.00146596706261,3.12872766099101,1.74467704820074,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,1.39560233594486,1.09220686065086,2.63766978228454,2.47532705920093,2.31978163009541,4.03395087871065,4.82155622419182,1.46062018077475,1.95173119516203,0.738726348460727,2.65200898617529,2.82109249330279,0.572471974262113,1.77936752594749,1.12988375635323,0.840547463227464,0.656804715599566,0.629686250509434,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0.786021525498329,0.205601498999509,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0.670700859703636,0.511450247374121,1.44575660953827,0.50133791063589,3.33146993609895,0,3.40644409211845,1.60709189178915,2.88248216701333,1.14185221401064,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,1.04142150482278,1.13061588384802,0.419499436209906,2.47606237746061,1.46296476575767,0.775250277507987,0.71153252537342,0.33472061276467,1.61131726843659,1.52054421143703,1.22031028774085,0.735326160691737,1.62028389576352,0.446498641420399,0.44905874525234,0.225222960966644,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,2.98183171017191,2.91250176828533,0.794455084879313,4.58938593198102,2.4826786753885,3.92474320099615,4.2699598291882,3.94668077467456,0.933633106199299,1.34710672069688,0.490385709340376,0.908144565869588,2.30470369792,0.70296429550139,1.24864030732128,1.1409436430889,1.94283284717341,1.17434498643765,0.809364721840658,0.702254033511242,1.42907919878425,3.0708579327942,0.516628905878827,0,3.21447008062124,0.910161361938026,4.31170885089743,0.673344455816265,2.62748891731125,0,1.31693286264251,3.0648779579902,0.901428353439581,1.58805056424029,4.12596162084383,1.49490172172997,0.635795703478686,2.70081986475962,1.54578793857658,4.12224864073007,1.67505170698431,0.337552664482532,1.65642908774038,2.01947019395292,1.28869858099219,1.77810662500693,2.84007674013291,2.21654616100809,0.508681776931463,0.193260853163297,0,0.286804595389004,1.21973706129595,1.98794652482228,2.44007280025989,2.69518743039963,1.26160425437814,0.36497735907583,4.69348596989448,9.64861407289328,1.38134921352481,2.78620756819187,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,4.20725321410337,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0.441463099414651,0.737930631258681,0.857839051492628,0.548751427043128,0,0.603173834469785,1.01847289674383,0.651616610620649,0,1.44331342025273,0.695582429850461,0.939269553886573,0.721832238805369,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0,1.00789276919316,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0.12624243342638,0.126995788584338,0,0,0,0.719792448923265,0.300343057843917,0,0.112131084345361,0.87192013766656,1.1734125731352,1.16344544182,0,0.845302752556,1.32969058292435,4.16029747645464,1.54324424557285,4.25547396069835,3.19706614819319,2.57360388584666,4.88359444852299,4.93944202068461,0.65147236858747,1.77695974371273,0.791951872933429,0.904318131178758,0.871533458600294,1.69954085009497,0,0.502257091432126,0,1.91699884393266,3.44585807502342,0,3.4747513600219,4.9314317412092,0.358121926479791,0.224170287987055,0,0.431255149719035,0.256686072559497,1.27047312111232,1.30139853857622,1.54657762555539,1.00509759200609,4.46557126157214,0,0,0,2.57652132610194,6.00204625271613,0,4.78332981520856,13.7390321373815,4.1002627908823,1.17141414992713,0.601892199455438,2.27407504055985,0,1.99267679560631,1.47495334833363,2.08520674723399,0.783204629850962,2.74514739048685,0,0,0,0,6.65741758041988,5.74541557326393,0.992431231275107,1.53461973288062,6.17452207752762,1.66580894032411,0.511707249066704,2.57366273829772,2.96836132889982,2.92998418225046,3.72879623157567,0.657017248110473,6.23105315020345,1.39452454151951,0.604297247958111,1.60405176242628,0.276242966807689,2.41110341145674,4.73437036817464,4.06485686374215,0,0.462092022626489,0,1.46139224653261,0.527758144464379,1.13733384070897,1.02056223165909,2.15915916102139,6.16909010761157,0.541892875087706,3.51182841698397,0.509752546090077,0,1.11937377361089,0.219259876645935,0,0.256450125116389,2.29610251989794,0,0.309123034943167,2.1060976908219,0.907604499126468,0,3.90036147621913,4.82051789532479,0.290012154876366,1.3864375540318,1.84204409671355,1.10269257987624,2.25582514223375,3.19036726611303,1.70453254832202,1.51354460599453,0,0.576570202095319,0,0.30347334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| ||
|short_description=p5@MAGED1 | |short_description=p5@MAGED1 | ||
}} | }} |
Latest revision as of 23:07, 15 September 2015
Short description: | p5@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAGED1_5end |
Coexpression cluster: | C4875_leiomyoma_Olfactory_Hair_smallcell_medial_tenocyte_Preadipocyte |
Association with transcript: | -232bp_to_ENST00000482599_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.29e-10 | 61 |
electrically active cell | 1.29e-10 | 61 |
muscle precursor cell | 1.33e-10 | 58 |
myoblast | 1.33e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-10 | 58 |
muscle cell | 7.50e-10 | 55 |
fibroblast | 1.24e-09 | 76 |
smooth muscle cell | 1.58e-09 | 43 |
smooth muscle myoblast | 1.58e-09 | 43 |
mesodermal cell | 2.14e-08 | 121 |
vascular associated smooth muscle cell | 2.35e-08 | 32 |
embryonic cell | 2.76e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.90e-13 | 78 |
dense mesenchyme tissue | 1.12e-11 | 73 |
somite | 1.90e-11 | 71 |
presomitic mesoderm | 1.90e-11 | 71 |
presumptive segmental plate | 1.90e-11 | 71 |
dermomyotome | 1.90e-11 | 71 |
trunk paraxial mesoderm | 1.90e-11 | 71 |
paraxial mesoderm | 4.38e-11 | 72 |
presumptive paraxial mesoderm | 4.38e-11 | 72 |
trunk mesenchyme | 3.57e-10 | 122 |
mesenchyme | 8.13e-10 | 160 |
entire embryonic mesenchyme | 8.13e-10 | 160 |
skeletal muscle tissue | 8.97e-10 | 62 |
striated muscle tissue | 8.97e-10 | 62 |
myotome | 8.97e-10 | 62 |
artery | 9.13e-10 | 42 |
arterial blood vessel | 9.13e-10 | 42 |
arterial system | 9.13e-10 | 42 |
muscle tissue | 4.39e-09 | 64 |
musculature | 4.39e-09 | 64 |
musculature of body | 4.39e-09 | 64 |
multilaminar epithelium | 5.97e-09 | 83 |
splanchnic layer of lateral plate mesoderm | 1.91e-08 | 83 |
unilaminar epithelium | 1.94e-07 | 148 |
epithelium | 3.38e-07 | 306 |
epithelial tube | 3.85e-07 | 117 |
cell layer | 4.23e-07 | 309 |
epithelial tube open at both ends | 6.31e-07 | 59 |
blood vessel | 6.31e-07 | 59 |
blood vasculature | 6.31e-07 | 59 |
vascular cord | 6.31e-07 | 59 |