FFCP PHASE1:Hg19::chrX:51638434..51638446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |EntrezGene=9500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |HGNC=6813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-305bp_to_ENST00000482599_5end | |association_with_transcript=-305bp_to_ENST00000482599_5end | ||
|cluster_id=chrX:51638434..51638446,+ | |||
|description=CAGE_peak_17_at_MAGED1_5end | |description=CAGE_peak_17_at_MAGED1_5end | ||
|id=chrX:51638434..51638446,+ | |id=chrX:51638434..51638446,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.88e-20!180;CL:0000393!2.78e-13!60;CL:0000211!2.78e-13!60;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000187!2.08e-12!54;CL:0000183!7.67e-12!59;CL:0000192!1.55e-10!42;CL:0000514!1.55e-10!42;CL:0000222!5.44e-09!119;CL:0002321!2.81e-08!248;CL:0000359!3.98e-08!32;CL:0000220!4.59e-08!246;CL:0000057!8.34e-08!75 | |ontology_enrichment_celltype=CL:0000055!4.88e-20!180;CL:0000393!2.78e-13!60;CL:0000211!2.78e-13!60;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000187!2.08e-12!54;CL:0000183!7.67e-12!59;CL:0000192!1.55e-10!42;CL:0000514!1.55e-10!42;CL:0000222!5.44e-09!119;CL:0002321!2.81e-08!248;CL:0000359!3.98e-08!32;CL:0000220!4.59e-08!246;CL:0000057!8.34e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.50e-09;32!CL:0000192;3.25e-08;43!CL:0000393;5.15e-07;61!CL:0000211;5.15e-07;61!CL:0000187;5.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,8.03e-12,61;CL:0000211,8.03e-12,61;CL:0000192,1.81e-11,43;CL:0000514,1.81e-11,43;CL:0000680,2.17e-11,58;CL:0000056,2.17e-11,58;CL:0000355,2.17e-11,58;CL:0000187,8.23e-11,55;CL:0000359,4.50e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-08;43!CL:0000355;3.05e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.81e-13!83;UBERON:0002329!1.81e-13!83;UBERON:0003077!1.81e-13!83;UBERON:0003059!1.81e-13!83;UBERON:0007282!1.81e-13!83;UBERON:0009618!1.81e-13!83;UBERON:0007285!1.81e-13!83;UBERON:0001134!2.20e-12!61;UBERON:0002036!2.20e-12!61;UBERON:0003082!2.20e-12!61;UBERON:0004290!3.52e-12!70;UBERON:0002385!2.36e-11!63;UBERON:0001015!2.36e-11!63;UBERON:0000383!2.36e-11!63;UBERON:0000490!2.86e-11!138;UBERON:0005256!2.78e-10!143;UBERON:0000486!1.94e-09!82;UBERON:0000481!2.15e-08!347;UBERON:0000475!2.30e-08!365;UBERON:0000483!9.91e-08!309;UBERON:0000119!2.06e-07!312;UBERON:0001637!3.43e-07!42;UBERON:0003509!3.43e-07!42;UBERON:0004572!3.43e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.40e-10,62;UBERON:0002036,2.40e-10,62;UBERON:0003082,2.40e-10,62;UBERON:0007524,2.92e-10,73;UBERON:0005256,4.83e-10,122;UBERON:0002385,7.08e-10,64;UBERON:0001015,7.08e-10,64;UBERON:0000383,7.08e-10,64;UBERON:0002329,1.34e-09,71;UBERON:0003059,1.34e-09,71;UBERON:0007282,1.34e-09,71;UBERON:0004290,1.34e-09,71;UBERON:0009618,1.34e-09,71;UBERON:0003077,2.14e-09,72;UBERON:0007285,2.14e-09,72;UBERON:0007503,2.66e-08,78;UBERON:0000490,6.69e-08,148;UBERON:0000486,1.62e-07,83;UBERON:0003104,2.48e-07,160;UBERON:0009142,2.48e-07,160 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,1.0007329835313,0,1.74467704820074,2.53299878168311,0,0,0,0,0.218441372130172,0.527533956456907,0.990130823680373,0.331397375727916,2.01697543935533,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,4.87613732627923,0.670700859703636,0.12786256184353,0,0,0.579386075843295,0,1.94653948121054,0.378139268656271,0.665188192387692,1.05401742831751,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0,0,0,0,0.488124115096339,0,0.81014194788176,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.886413581652058,0.132409180813219,0.573673241497627,0,0,0,1.48000529050296,0.311211035399766,0.808264032418128,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.408308342509787,0.368502951935304,0.103325781175765,0,0.989067717114227,0,0,0.336672227908132,0.750711119231785,0,0.438977620880838,1.83892677479412,0.300476117813194,0.113432183160021,0.179389635688862,0.640672166455702,0.211931901159562,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0,0.828449087780694,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.132529768321485,0.348581828608555,0.621966330092223,0.252320850875628,0,0,1.92972281457866,0,0.464367928031979,1.44375896333917,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0.577465791044295,0,0,0,0,0,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.514414748524284,0,0.799266537048298,0.428933980974443,0.542621605391443,0.823240336780769,0,1.06617584622764,1.58390374586686,0.602878754119172,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0.434343920002738,1.64381058040307,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,1.24782516918484,3.21172179834891,0.788512075169673,0.234282829985426,0.300946099727719,2.27407504055985,2.0694614258501,0,0.553107505625109,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0,0,1.20956117331872,0,0.153461973288062,1.68396056659844,0.128139149255701,0,0.482561763430822,1.48418066444991,0.771048469013278,0.355123450626254,0.246381468041427,1.55776328755086,1.04589340613963,0.120859449591622,0.200506470303285,0.0920809889358963,0.459257792658427,1.0925470080403,1.31124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.457847324091717,0.082509499920588,0,0.650060246036521,1.6068392984416,0.096670718292122,0.308097234229289,0.614014698904518,0.275673144969061,0.429680979473094,1.59518363305651,0.340906509664404,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,1.39453664789186,0.62962469366128,0,0,1.06461206063404,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0.762520775695299,0.255897791311334,0,0.318203247925937,2.35484592059769,0.359744915166629,2.47083326762449,1.29593642580255,0.202182481573316,6.34041284692033,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,1.41405431953713,4.52032466480971,0.551365343546124,1.32687795048244,0.876901770507525,1.15755106853338,0.655894752046633,0.405820753925408,2.16876448669825,1.12678241012897,0,0.392996164052485,0.35667105148125,0,0.633322905892992,0,0.379473173765715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,1.9882952955326,0.562677665642051,0.333926115068718,0,0,0,0,0.251932747854276,0,0.123084805461069,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0.694499979733169,0,0.241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|phase1_expression=0.181678379270557,0.642301571672949,0,1.0007329835313,0,1.74467704820074,2.53299878168311,0,0,0,0,0.218441372130172,0.527533956456907,0.990130823680373,0.331397375727916,2.01697543935533,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,4.87613732627923,0.670700859703636,0.12786256184353,0,0,0.579386075843295,0,1.94653948121054,0.378139268656271,0.665188192387692,1.05401742831751,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0,0,0,0,0.488124115096339,0,0.81014194788176,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.886413581652058,0.132409180813219,0.573673241497627,0,0,0,1.48000529050296,0.311211035399766,0.808264032418128,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.408308342509787,0.368502951935304,0.103325781175765,0,0.989067717114227,0,0,0.336672227908132,0.750711119231785,0,0.438977620880838,1.83892677479412,0.300476117813194,0.113432183160021,0.179389635688862,0.640672166455702,0.211931901159562,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0,0.828449087780694,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.132529768321485,0.348581828608555,0.621966330092223,0.252320850875628,0,0,1.92972281457866,0,0.464367928031979,1.44375896333917,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0.577465791044295,0,0,0,0,0,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.514414748524284,0,0.799266537048298,0.428933980974443,0.542621605391443,0.823240336780769,0,1.06617584622764,1.58390374586686,0.602878754119172,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0.434343920002738,1.64381058040307,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,1.24782516918484,3.21172179834891,0.788512075169673,0.234282829985426,0.300946099727719,2.27407504055985,2.0694614258501,0,0.553107505625109,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0,0,1.20956117331872,0,0.153461973288062,1.68396056659844,0.128139149255701,0,0.482561763430822,1.48418066444991,0.771048469013278,0.355123450626254,0.246381468041427,1.55776328755086,1.04589340613963,0.120859449591622,0.200506470303285,0.0920809889358963,0.459257792658427,1.0925470080403,1.31124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0.457847324091717,0.082509499920588,0,0.650060246036521,1.6068392984416,0.096670718292122,0.308097234229289,0.614014698904518,0.275673144969061,0.429680979473094,1.59518363305651,0.340906509664404,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,1.39453664789186,0.62962469366128,0,0,1.06461206063404,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0.762520775695299,0.255897791311334,0,0.318203247925937,2.35484592059769,0.359744915166629,2.47083326762449,1.29593642580255,0.202182481573316,6.34041284692033,1.26377536871694,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,1.41405431953713,4.52032466480971,0.551365343546124,1.32687795048244,0.876901770507525,1.15755106853338,0.655894752046633,0.405820753925408,2.16876448669825,1.12678241012897,0,0.392996164052485,0.35667105148125,0,0.633322905892992,0,0.379473173765715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,1.9882952955326,0.562677665642051,0.333926115068718,0,0,0,0,0.251932747854276,0,0.123084805461069,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0.694499979733169,0,0.241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| ||
|short_description=p17@MAGED1 | |short_description=p17@MAGED1 | ||
}} | }} |
Latest revision as of 23:05, 15 September 2015
Short description: | p17@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MAGED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -305bp_to_ENST00000482599_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 8.03e-12 | 61 |
electrically active cell | 8.03e-12 | 61 |
smooth muscle cell | 1.81e-11 | 43 |
smooth muscle myoblast | 1.81e-11 | 43 |
muscle precursor cell | 2.17e-11 | 58 |
myoblast | 2.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.17e-11 | 58 |
muscle cell | 8.23e-11 | 55 |
vascular associated smooth muscle cell | 4.50e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.40e-10 | 62 |
striated muscle tissue | 2.40e-10 | 62 |
myotome | 2.40e-10 | 62 |
dense mesenchyme tissue | 2.92e-10 | 73 |
trunk mesenchyme | 4.83e-10 | 122 |
muscle tissue | 7.08e-10 | 64 |
musculature | 7.08e-10 | 64 |
musculature of body | 7.08e-10 | 64 |
somite | 1.34e-09 | 71 |
presomitic mesoderm | 1.34e-09 | 71 |
presumptive segmental plate | 1.34e-09 | 71 |
dermomyotome | 1.34e-09 | 71 |
trunk paraxial mesoderm | 1.34e-09 | 71 |
paraxial mesoderm | 2.14e-09 | 72 |
presumptive paraxial mesoderm | 2.14e-09 | 72 |
epithelial vesicle | 2.66e-08 | 78 |
unilaminar epithelium | 6.69e-08 | 148 |
multilaminar epithelium | 1.62e-07 | 83 |
mesenchyme | 2.48e-07 | 160 |
entire embryonic mesenchyme | 2.48e-07 | 160 |