FFCP PHASE1:Hg19::chrX:51638193..51638277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |EntrezGene=9500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |HGNC=6813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-474bp_to_ENST00000482599_5end | |association_with_transcript=-474bp_to_ENST00000482599_5end | ||
|cluster_id=chrX:51638193..51638277,+ | |||
|description=CAGE_peak_3_at_MAGED1_5end | |description=CAGE_peak_3_at_MAGED1_5end | ||
|id=chrX:51638193..51638277,+ | |id=chrX:51638193..51638277,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.93e-29!180;CL:0000057!6.37e-17!75;CL:0000222!3.60e-15!119;CL:0000183!6.35e-14!59;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000393!4.10e-13!60;CL:0000211!4.10e-13!60;CL:0000187!1.06e-12!54;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0002321!2.82e-11!248;CL:0000220!6.01e-11!246;CL:0000359!3.12e-09!32 | |ontology_enrichment_celltype=CL:0000055!1.93e-29!180;CL:0000057!6.37e-17!75;CL:0000222!3.60e-15!119;CL:0000183!6.35e-14!59;CL:0000680!2.67e-13!57;CL:0000056!2.67e-13!57;CL:0000355!2.67e-13!57;CL:0000393!4.10e-13!60;CL:0000211!4.10e-13!60;CL:0000187!1.06e-12!54;CL:0000192!1.16e-11!42;CL:0000514!1.16e-11!42;CL:0002321!2.82e-11!248;CL:0000220!6.01e-11!246;CL:0000359!3.12e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.55e-09;32!CL:0000192;5.60e-08;43!CL:0000134;5.62e-08;55!CL:0000057;2.72e-07;73!CL:0000187;2.73e-07;55!CL:0000723;5.22e-07;61!CL:0000048;5.53e-07;58 | |ontology_enrichment_celltype_v019=CL:0000359;5.55e-09;32!CL:0000192;5.60e-08;43!CL:0000134;5.62e-08;55!CL:0000057;2.72e-07;73!CL:0000187;2.73e-07;55!CL:0000723;5.22e-07;61!CL:0000048;5.53e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-17,76;CL:0000222,7.09e-15,121;CL:0000680,5.93e-13,58;CL:0000056,5.93e-13,58;CL:0000355,5.93e-13,58;CL:0000393,8.63e-13,61;CL:0000211,8.63e-13,61;CL:0000187,2.46e-12,55;CL:0000192,3.37e-11,43;CL:0000514,3.37e-11,43;CL:0002321,1.19e-09,250;CL:0000359,1.81e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;5.60e-08;43!CL:0000355;8.77e-07;58 | |ontology_enrichment_development_v019=CL:0000514;5.60e-08;43!CL:0000355;8.77e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.66e-18!365;UBERON:0000914!3.15e-15!83;UBERON:0002329!3.15e-15!83;UBERON:0003077!3.15e-15!83;UBERON:0003059!3.15e-15!83;UBERON:0007282!3.15e-15!83;UBERON:0009618!3.15e-15!83;UBERON:0007285!3.15e-15!83;UBERON:0005256!9.71e-15!143;UBERON:0004290!2.62e-14!70;UBERON:0000119!4.75e-14!312;UBERON:0000483!7.24e-14!309;UBERON:0001134!8.63e-13!61;UBERON:0002036!8.63e-13!61;UBERON:0003082!8.63e-13!61;UBERON:0002049!1.62e-12!79;UBERON:0007798!1.62e-12!79;UBERON:0000486!2.49e-12!82;UBERON:0004872!3.54e-12!84;UBERON:0002385!4.78e-12!63;UBERON:0001015!4.78e-12!63;UBERON:0000383!4.78e-12!63;UBERON:0001637!1.76e-11!42;UBERON:0003509!1.76e-11!42;UBERON:0004572!1.76e-11!42;UBERON:0002100!4.08e-11!216;UBERON:0000481!4.46e-11!347;UBERON:0000490!7.22e-11!138;UBERON:0001981!2.51e-10!60;UBERON:0007500!2.51e-10!60;UBERON:0004537!2.51e-10!60;UBERON:0006965!2.51e-10!60;UBERON:0000055!4.17e-10!69;UBERON:0003914!6.39e-10!118;UBERON:0000477!1.65e-09!286;UBERON:0004573!1.81e-09!33;UBERON:0004571!1.81e-09!33;UBERON:0004111!5.87e-09!241;UBERON:0000025!2.02e-08!194;UBERON:0000468!3.72e-08!659;UBERON:0004535!1.42e-07!110;UBERON:0001009!3.70e-07!113;UBERON:0002199!4.71e-07!45;UBERON:0002416!4.71e-07!45 | |ontology_enrichment_uberon=UBERON:0000475!2.66e-18!365;UBERON:0000914!3.15e-15!83;UBERON:0002329!3.15e-15!83;UBERON:0003077!3.15e-15!83;UBERON:0003059!3.15e-15!83;UBERON:0007282!3.15e-15!83;UBERON:0009618!3.15e-15!83;UBERON:0007285!3.15e-15!83;UBERON:0005256!9.71e-15!143;UBERON:0004290!2.62e-14!70;UBERON:0000119!4.75e-14!312;UBERON:0000483!7.24e-14!309;UBERON:0001134!8.63e-13!61;UBERON:0002036!8.63e-13!61;UBERON:0003082!8.63e-13!61;UBERON:0002049!1.62e-12!79;UBERON:0007798!1.62e-12!79;UBERON:0000486!2.49e-12!82;UBERON:0004872!3.54e-12!84;UBERON:0002385!4.78e-12!63;UBERON:0001015!4.78e-12!63;UBERON:0000383!4.78e-12!63;UBERON:0001637!1.76e-11!42;UBERON:0003509!1.76e-11!42;UBERON:0004572!1.76e-11!42;UBERON:0002100!4.08e-11!216;UBERON:0000481!4.46e-11!347;UBERON:0000490!7.22e-11!138;UBERON:0001981!2.51e-10!60;UBERON:0007500!2.51e-10!60;UBERON:0004537!2.51e-10!60;UBERON:0006965!2.51e-10!60;UBERON:0000055!4.17e-10!69;UBERON:0003914!6.39e-10!118;UBERON:0000477!1.65e-09!286;UBERON:0004573!1.81e-09!33;UBERON:0004571!1.81e-09!33;UBERON:0004111!5.87e-09!241;UBERON:0000025!2.02e-08!194;UBERON:0000468!3.72e-08!659;UBERON:0004535!1.42e-07!110;UBERON:0001009!3.70e-07!113;UBERON:0002199!4.71e-07!45;UBERON:0002416!4.71e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.02e-08;33!UBERON:0004571;2.02e-08;33!UBERON:0001637;2.36e-08;42!UBERON:0003509;2.36e-08;42!UBERON:0004572;2.36e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.02e-08;33!UBERON:0004571;2.02e-08;33!UBERON:0001637;2.36e-08;42!UBERON:0003509;2.36e-08;42!UBERON:0004572;2.36e-08;42 | ||
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| ||
|short_description=p3@MAGED1 | |short_description=p3@MAGED1 | ||
}} | }} |
Latest revision as of 23:03, 15 September 2015
Short description: | p3@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAGED1_5end |
Coexpression cluster: | NA |
Association with transcript: | -474bp_to_ENST00000482599_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.72e-17 | 76 |
mesodermal cell | 7.09e-15 | 121 |
muscle precursor cell | 5.93e-13 | 58 |
myoblast | 5.93e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.93e-13 | 58 |
electrically responsive cell | 8.63e-13 | 61 |
electrically active cell | 8.63e-13 | 61 |
muscle cell | 2.46e-12 | 55 |
smooth muscle cell | 3.37e-11 | 43 |
smooth muscle myoblast | 3.37e-11 | 43 |
embryonic cell | 1.19e-09 | 250 |
vascular associated smooth muscle cell | 1.81e-09 | 32 |