FFCP PHASE1:Hg19::chr7:121513532..121513545,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9685 | |||
|TSSclassifier=strong | |||
|UniProt=C9JFM0 | |||
|association_with_transcript=117bp_to_ENST00000449182_5end | |||
|cluster_id=chr7:121513532..121513545,+ | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_6_at_PTPRZ1_5end | |||
|id=chr7:121513532..121513545,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.88e-20!8;CL:0000540!4.74e-15!6;CL:0000031!4.74e-15!6;CL:0000404!4.74e-15!6;CL:0002322!8.49e-12!5;CL:0002319!3.18e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.26e-27;6!CL:0000404;2.26e-27;6!CL:0000047;9.14e-22;2!CL:0002319;7.86e-18;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.65e-45,8;CL:0000540,2.50e-27,6;CL:0000031,2.50e-27,6;CL:0000404,2.50e-27,6;CL:0002319,8.17e-18,25;CL:0000133,1.11e-09,59;CL:0000221,8.29e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.26e-27;6!CL:0000133;2.73e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.42e-11;1!DOID:3149;2.42e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.18e-11,1;DOID:3149,2.18e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.36e-53!82;UBERON:0005743!2.90e-50!86;UBERON:0000073!3.27e-46!94;UBERON:0001016!3.27e-46!94;UBERON:0001049!9.27e-44!57;UBERON:0005068!9.27e-44!57;UBERON:0006241!9.27e-44!57;UBERON:0007135!9.27e-44!57;UBERON:0002616!2.92e-34!59;UBERON:0002020!7.84e-34!34;UBERON:0003528!7.84e-34!34;UBERON:0001893!1.49e-33!34;UBERON:0002791!7.58e-32!33;UBERON:0000955!1.83e-31!69;UBERON:0006238!1.83e-31!69;UBERON:0001869!2.95e-30!32;UBERON:0004121!2.65e-29!169;UBERON:0002780!3.61e-29!41;UBERON:0001890!3.61e-29!41;UBERON:0006240!3.61e-29!41;UBERON:0003075!1.22e-28!86;UBERON:0007284!1.22e-28!86;UBERON:0003080!2.61e-28!42;UBERON:0000924!2.83e-28!173;UBERON:0006601!2.83e-28!173;UBERON:0002346!7.00e-27!90;UBERON:0000956!5.90e-24!25;UBERON:0000203!5.90e-24!25;UBERON:0007023!3.14e-23!115;UBERON:0002619!1.59e-21!22;UBERON:0001950!8.91e-21!20;UBERON:0000033!1.02e-18!123;UBERON:0000153!1.93e-18!129;UBERON:0007811!1.93e-18!129;UBERON:0003056!2.57e-17!61;UBERON:0003076!9.63e-17!15;UBERON:0003057!9.63e-17!15;UBERON:0002298!2.83e-13!8;UBERON:0002308!2.56e-11!9;UBERON:0000125!2.56e-11!9;UBERON:0004733!3.76e-11!12;UBERON:0002028!3.76e-11!12;UBERON:0007277!3.76e-11!12;UBERON:0004732!3.59e-10!13;UBERON:0000200!1.97e-09!6;UBERON:0002420!2.35e-08!9;UBERON:0007245!2.35e-08!9;UBERON:0010009!2.35e-08!9;UBERON:0010011!2.35e-08!9;UBERON:0000454!2.35e-08!9;UBERON:0002240!5.33e-08!3;UBERON:0002771!7.03e-08!3;UBERON:0000988!9.04e-08!3;UBERON:0009663!1.05e-07!7;UBERON:0001872!1.45e-07!5;UBERON:0001896!1.74e-07!3;UBERON:0005290!1.74e-07!3;UBERON:0010096!1.74e-07!3;UBERON:0006331!2.27e-07!3;UBERON:0001871!2.28e-07!7;UBERON:0000025!3.46e-07!194;UBERON:0002021!5.37e-07!5;UBERON:0004111!8.94e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.10e-13;25!UBERON:0000203;2.10e-13;25!UBERON:0002619;9.61e-11;22!UBERON:0002791;1.12e-09;32!UBERON:0001869;1.31e-09;32!UBERON:0003528;5.98e-09;34!UBERON:0002020;5.98e-09;34!UBERON:0001893;2.13e-08;34!UBERON:0001950;7.34e-08;20!UBERON:0000073;4.33e-07;53!UBERON:0002616;4.33e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-21,81;UBERON:0001016,3.65e-19,89;UBERON:0000956,2.33e-13,25;UBERON:0000203,2.33e-13,25;UBERON:0002619,1.06e-10,22;UBERON:0002791,1.93e-10,32;UBERON:0001869,1.93e-10,32;UBERON:0001049,3.89e-10,56;UBERON:0005068,3.89e-10,56;UBERON:0006241,3.89e-10,56;UBERON:0007135,3.89e-10,56;UBERON:0003528,8.03e-10,34;UBERON:0002020,8.03e-10,34;UBERON:0001893,8.03e-10,34;UBERON:0004121,4.24e-09,171;UBERON:0000924,4.24e-09,171;UBERON:0006601,4.24e-09,171;UBERON:0011216,7.43e-09,223;UBERON:0000073,2.76e-08,53;UBERON:0002616,2.76e-08,53;UBERON:0002780,4.10e-08,41;UBERON:0001890,4.10e-08,41;UBERON:0003080,4.10e-08,41;UBERON:0006240,4.10e-08,41;UBERON:0001950,7.68e-08,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28988789704845,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.662648841607426,0.929551542956147,0.207322110030741,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.9583699904862,16.9181810014908,6.18631050222156,7.53823194004569,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,1.593108275997,0,0,0.344743373241465,0,0,0,0.60298219312704,0,0.552896299656123,0.591095237907095,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,0,2.14250933141343,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.443175571691151,0,0,0,0,0,3.32156128881155,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0896272488926,0.964518890790115,0.687697182986169,2.07720169014593,0,0,0.546746009922222,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.751145584238999,0.573409195690071,0.554645257684261,0.434674820589684,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,4.03314713954749,0.138314504928436,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.253663240775627,7.11067251723685,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,1.01954599465248,0.263091094251396,0,0,0.078493092850514,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.588925401344836,0.891139200981258,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,2.61810414204226,0,0,0,0,0.378499274505237,0.327796715891087,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0.517164979309476,0,0.23806443146374,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@PTPRZ1 | |||
}} |
Latest revision as of 23:00, 15 September 2015
Short description: | p6@PTPRZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTPRZ1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 117bp_to_ENST00000449182_5end |
EntrezGene: | PTPRZ1 |
HGNC: | 9685 |
UniProt: | C9JFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.65e-45 | 8 |
neuron | 2.50e-27 | 6 |
neuroblast | 2.50e-27 | 6 |
electrically signaling cell | 2.50e-27 | 6 |
neural cell | 8.17e-18 | 25 |
neurectodermal cell | 1.11e-09 | 59 |
ectodermal cell | 8.29e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.80e-21 | 81 |
nervous system | 3.65e-19 | 89 |
cerebral cortex | 2.33e-13 | 25 |
pallium | 2.33e-13 | 25 |
regional part of cerebral cortex | 1.06e-10 | 22 |
regional part of telencephalon | 1.93e-10 | 32 |
cerebral hemisphere | 1.93e-10 | 32 |
neural tube | 3.89e-10 | 56 |
neural rod | 3.89e-10 | 56 |
future spinal cord | 3.89e-10 | 56 |
neural keel | 3.89e-10 | 56 |
brain grey matter | 8.03e-10 | 34 |
gray matter | 8.03e-10 | 34 |
telencephalon | 8.03e-10 | 34 |
ectoderm-derived structure | 4.24e-09 | 171 |
ectoderm | 4.24e-09 | 171 |
presumptive ectoderm | 4.24e-09 | 171 |
organ system subdivision | 7.43e-09 | 223 |
regional part of nervous system | 2.76e-08 | 53 |
regional part of brain | 2.76e-08 | 53 |
regional part of forebrain | 4.10e-08 | 41 |
forebrain | 4.10e-08 | 41 |
anterior neural tube | 4.10e-08 | 41 |
future forebrain | 4.10e-08 | 41 |
neocortex | 7.68e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.18e-11 | 1 |
keratoacanthoma | 2.18e-11 | 1 |