FFCP PHASE1:Hg19::chr20:35173246..35173275,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10398 | |EntrezGene=10398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15754 | |HGNC=15754 | ||
|TSSclassifier=strong | |||
|UniProt=P24844 | |UniProt=P24844 | ||
|association_with_transcript=0bp_to_J02854_5end | |association_with_transcript=0bp_to_J02854_5end | ||
|cluster_id=chr20:35173246..35173275,+ | |||
|coexpression_cluster_id=C384 | |coexpression_cluster_id=C384 | ||
|description=CAGE_peak_3_at_MYL9_5end | |description=CAGE_peak_3_at_MYL9_5end | ||
|id=chr20:35173246..35173275,+ | |id=chr20:35173246..35173275,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.94e-21!180;CL:0000680!1.35e-12!57;CL:0000056!1.35e-12!57;CL:0000355!1.35e-12!57;CL:0000183!2.12e-12!59;CL:0000187!4.61e-12!54;CL:0000057!2.07e-11!75;CL:0000192!2.52e-11!42;CL:0000514!2.52e-11!42;CL:0000393!4.08e-11!60;CL:0000211!4.08e-11!60;CL:0000136!1.09e-09!15;CL:0000359!2.39e-09!32 | |ontology_enrichment_celltype=CL:0000055!7.94e-21!180;CL:0000680!1.35e-12!57;CL:0000056!1.35e-12!57;CL:0000355!1.35e-12!57;CL:0000183!2.12e-12!59;CL:0000187!4.61e-12!54;CL:0000057!2.07e-11!75;CL:0000192!2.52e-11!42;CL:0000514!2.52e-11!42;CL:0000393!4.08e-11!60;CL:0000211!4.08e-11!60;CL:0000136!1.09e-09!15;CL:0000359!2.39e-09!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.79e-11;13!CL:0000359;1.76e-09;32!CL:0000192;6.99e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.06e-12,43;CL:0000514,6.06e-12,43;CL:0000136,1.17e-11,15;CL:0000680,4.60e-11,58;CL:0000056,4.60e-11,58;CL:0000355,4.60e-11,58;CL:0000187,2.04e-10,55;CL:0000359,7.54e-10,32;CL:0000057,1.71e-09,76;CL:0000393,9.58e-09,61;CL:0000211,9.58e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;6.99e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.51e-14!63;UBERON:0001015!1.51e-14!63;UBERON:0000383!1.51e-14!63;UBERON:0000914!2.39e-14!83;UBERON:0002329!2.39e-14!83;UBERON:0003077!2.39e-14!83;UBERON:0003059!2.39e-14!83;UBERON:0007282!2.39e-14!83;UBERON:0009618!2.39e-14!83;UBERON:0007285!2.39e-14!83;UBERON:0005256!7.14e-14!143;UBERON:0001134!1.75e-13!61;UBERON:0002036!1.75e-13!61;UBERON:0003082!1.75e-13!61;UBERON:0004290!3.18e-13!70;UBERON:0000486!7.09e-12!82;UBERON:0002100!2.76e-10!216;UBERON:0000481!6.36e-09!347;UBERON:0004872!8.42e-09!84;UBERON:0003104!9.94e-09!238;UBERON:0009142!9.94e-09!238;UBERON:0007100!3.99e-08!27;UBERON:0000468!5.35e-08!659;UBERON:0001009!6.26e-08!113;UBERON:0000490!8.70e-08!138;UBERON:0000475!1.11e-07!365;UBERON:0004535!3.49e-07!110;UBERON:0000948!4.76e-07!24;UBERON:0005498!4.76e-07!24;UBERON:0004140!4.76e-07!24;UBERON:0009881!4.76e-07!24;UBERON:0004141!4.76e-07!24;UBERON:0003084!4.76e-07!24;UBERON:0007005!4.76e-07!24;UBERON:0004139!4.76e-07!24;UBERON:0004291!4.76e-07!24 | |ontology_enrichment_uberon=UBERON:0002385!1.51e-14!63;UBERON:0001015!1.51e-14!63;UBERON:0000383!1.51e-14!63;UBERON:0000914!2.39e-14!83;UBERON:0002329!2.39e-14!83;UBERON:0003077!2.39e-14!83;UBERON:0003059!2.39e-14!83;UBERON:0007282!2.39e-14!83;UBERON:0009618!2.39e-14!83;UBERON:0007285!2.39e-14!83;UBERON:0005256!7.14e-14!143;UBERON:0001134!1.75e-13!61;UBERON:0002036!1.75e-13!61;UBERON:0003082!1.75e-13!61;UBERON:0004290!3.18e-13!70;UBERON:0000486!7.09e-12!82;UBERON:0002100!2.76e-10!216;UBERON:0000481!6.36e-09!347;UBERON:0004872!8.42e-09!84;UBERON:0003104!9.94e-09!238;UBERON:0009142!9.94e-09!238;UBERON:0007100!3.99e-08!27;UBERON:0000468!5.35e-08!659;UBERON:0001009!6.26e-08!113;UBERON:0000490!8.70e-08!138;UBERON:0000475!1.11e-07!365;UBERON:0004535!3.49e-07!110;UBERON:0000948!4.76e-07!24;UBERON:0005498!4.76e-07!24;UBERON:0004140!4.76e-07!24;UBERON:0009881!4.76e-07!24;UBERON:0004141!4.76e-07!24;UBERON:0003084!4.76e-07!24;UBERON:0007005!4.76e-07!24;UBERON:0004139!4.76e-07!24;UBERON:0004291!4.76e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.55e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.83e-13,122;UBERON:0002385,2.27e-12,64;UBERON:0001015,2.27e-12,64;UBERON:0000383,2.27e-12,64;UBERON:0003104,8.86e-12,160;UBERON:0009142,8.86e-12,160;UBERON:0007503,2.59e-11,78;UBERON:0001134,3.16e-11,62;UBERON:0002036,3.16e-11,62;UBERON:0003082,3.16e-11,62;UBERON:0007524,4.44e-11,73;UBERON:0002329,5.33e-11,71;UBERON:0003059,5.33e-11,71;UBERON:0007282,5.33e-11,71;UBERON:0004290,5.33e-11,71;UBERON:0009618,5.33e-11,71;UBERON:0003077,1.25e-10,72;UBERON:0007285,1.25e-10,72;UBERON:0002100,2.48e-09,199;UBERON:0000486,5.18e-09,83;UBERON:0004872,3.09e-08,83;UBERON:0000926,7.28e-08,315;UBERON:0004120,7.28e-08,315;UBERON:0006603,7.28e-08,315;UBERON:0001637,3.68e-07,42;UBERON:0003509,3.68e-07,42;UBERON:0004572,3.68e-07,42;UBERON:0007100,3.69e-07,27 | |||
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| ||
|short_description=p3@MYL9 | |short_description=p3@MYL9 | ||
}} | }} |
Latest revision as of 22:55, 15 September 2015
Short description: | p3@MYL9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYL9_5end |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | 0bp_to_J02854_5end |
EntrezGene: | MYL9 |
HGNC: | 15754 |
UniProt: | P24844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.06e-12 | 43 |
smooth muscle myoblast | 6.06e-12 | 43 |
fat cell | 1.17e-11 | 15 |
muscle precursor cell | 4.60e-11 | 58 |
myoblast | 4.60e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.60e-11 | 58 |
muscle cell | 2.04e-10 | 55 |
vascular associated smooth muscle cell | 7.54e-10 | 32 |
fibroblast | 1.71e-09 | 76 |
electrically responsive cell | 9.58e-09 | 61 |
electrically active cell | 9.58e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.83e-13 | 122 |
muscle tissue | 2.27e-12 | 64 |
musculature | 2.27e-12 | 64 |
musculature of body | 2.27e-12 | 64 |
mesenchyme | 8.86e-12 | 160 |
entire embryonic mesenchyme | 8.86e-12 | 160 |
epithelial vesicle | 2.59e-11 | 78 |
skeletal muscle tissue | 3.16e-11 | 62 |
striated muscle tissue | 3.16e-11 | 62 |
myotome | 3.16e-11 | 62 |
dense mesenchyme tissue | 4.44e-11 | 73 |
somite | 5.33e-11 | 71 |
presomitic mesoderm | 5.33e-11 | 71 |
presumptive segmental plate | 5.33e-11 | 71 |
dermomyotome | 5.33e-11 | 71 |
trunk paraxial mesoderm | 5.33e-11 | 71 |
paraxial mesoderm | 1.25e-10 | 72 |
presumptive paraxial mesoderm | 1.25e-10 | 72 |
trunk | 2.48e-09 | 199 |
multilaminar epithelium | 5.18e-09 | 83 |
splanchnic layer of lateral plate mesoderm | 3.09e-08 | 83 |
mesoderm | 7.28e-08 | 315 |
mesoderm-derived structure | 7.28e-08 | 315 |
presumptive mesoderm | 7.28e-08 | 315 |
artery | 3.68e-07 | 42 |
arterial blood vessel | 3.68e-07 | 42 |
arterial system | 3.68e-07 | 42 |
primary circulatory organ | 3.69e-07 | 27 |