FFCP PHASE1:Hg19::chr12:104179526..104179530,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51559 | |EntrezGene=51559 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30826 | |HGNC=30826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-364bp_to_ENST00000447799_5end | |association_with_transcript=-364bp_to_ENST00000447799_5end | ||
|cluster_id=chr12:104179526..104179530,- | |||
|description=CAGE_peak_5_at_NT5DC3_5end | |description=CAGE_peak_5_at_NT5DC3_5end | ||
|id=chr12:104179526..104179530,- | |id=chr12:104179526..104179530,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.64e-07;1!UBERON:0005425;8.64e-07;1 | |ontology_enrichment_development_v019=UBERON:0000358;8.64e-07;1!UBERON:0005425;8.64e-07;1 | ||
|ontology_enrichment_disease=DOID:0050687!8.81e-14!143;DOID:162!2.82e-10!235;DOID:14566!4.13e-10!239;DOID:305!5.84e-08!106 | |ontology_enrichment_disease=DOID:0050687!8.81e-14!143;DOID:162!2.82e-10!235;DOID:14566!4.13e-10!239;DOID:305!5.84e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1799;8.64e-07;1!DOID:10165;8.64e-07;1!DOID:1798;8.64e-07;1!DOID:5662;8.64e-07;1 | |ontology_enrichment_disease_v019=DOID:1799;8.64e-07;1!DOID:10165;8.64e-07;1!DOID:1798;8.64e-07;1!DOID:5662;8.64e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-08!115;UBERON:0000073!5.81e-08!94;UBERON:0001016!5.81e-08!94;UBERON:0005743!8.83e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!2.61e-08!115;UBERON:0000073!5.81e-08!94;UBERON:0001016!5.81e-08!94;UBERON:0005743!8.83e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;6.21e-07;1!UBERON:0000941;8.64e-07;1!UBERON:0001785;8.64e-07;1!UBERON:0002464;8.64e-07;1!UBERON:0004904;8.64e-07;1!UBERON:0001021;8.64e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006834;6.21e-07;1!UBERON:0000941;8.64e-07;1!UBERON:0001785;8.64e-07;1!UBERON:0002464;8.64e-07;1!UBERON:0004904;8.64e-07;1!UBERON:0001021;8.64e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,6.59e-07,1;UBERON:0000941,7.35e-07,1;UBERON:0001785,7.35e-07,1;UBERON:0002464,7.35e-07,1;UBERON:0004904,7.35e-07,1;UBERON:0001021,7.35e-07,1;UBERON:0003902,7.35e-07,1;UBERON:0005425,7.35e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.710846162437108,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.886917589850256,0.087834785693126,1.0478326039817,0,0,0,0,0,1.43094374583205,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,7.75560528296651,0,0,0.12663051166458,0,1.72101972449288,0,1.12135520028461,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0.161646056818812,0,0.302256294682921,0,0.386521706326594,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,1.1240175325762,1.00528972411631,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0.414656231081544,0,0,0,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0.0920809889358963,0,0.364182336013434,0.655622074797121,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.183138929636687,0.907604499126468,0,0,0,0,0.154048617114644,0,0.275673144969061,0.322260734604821,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0.185803175125719,0,0.142283686696828,0,0.798317485731266,0,0.423347165447766,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,4.83031449570902,0.23874448473769,0,0.614321404198464,0,0.562677665642051,0,0.16480387422676,1.47787785689595,2.78947183551498,0.552567831062295,0.755798243562828,0.102268682502155,0.123084805461069,0,0,1.07412704805365,0,1.7755813014648,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,1.137934482855,0,0.236387681767936,0.689486746482929,0.874813840149763,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,0.923403102045565,0,0,0.538545866458633,0,0,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0.326465616318295,0.424059214301822,0,0.995261931078505,1.94606641907346,0.611030144933625,0,0.123563938946503,0.104421949505455,0.202203398942031,0.802577647298789,0,0.729819156862664,0.19566461893209,0.728341138602278,1.97292201424695,0,0.61214552326098,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.284609546029793,0.277349346026277,0,0.783939179315021,0,0.52418000472609,0.51595809741485,0.580537987734511,0.219267951258557,0.246346371159628,0.290967049465258,0.176512253383001,0,0.137041924646751,0,0.316553979779393,0,0,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0.576219191952599,0.49701014226173,0,0.271808412147228,0.209205692624666,0,0.577901179803038,0.600420288709789,0,1.27746588066972,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0.720599767084807,3.49487848582361,0,0,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0.83088067605837,0.2249738915515,0,0.485996453264197,0,0,0,0.316801009558219,0.35857467866569,0.767660789277781,0,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0.339936274560377,0,0,0.387848869084652,0.66116300871345,0.171086837884329,0,0,0.628817220398664,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0.886068179966986,0,0.3755727921195,1.14681839138014,0.110929051536852,0.745156835296601,0.138348634936231,0,0.303298235083296,0.856396000634902,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0.754703705257725,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0.512483037175893,0,0,0.276516872303462,0,0,0.327130788511688,0.982829546539238,0.491545817507439,0,0.39997479170986,0,0,2.27006381426734,0,0.139879507719444,0,0.255788742607303,0.107824811396682,0.314531883711793,0.54604819096007,0.678930119816101,1.06287460050841,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.319267718114302,0,0.504143392443436,0.0691572524642179,0.484426936895553,2.85538840518309,0.490738592505128,0.707818340086442,0.183428598521679,0,0,0,0,0.0752103283492573,1.61364054962816,0.781514011233092,2.09525355585138,0.49131575253029,0.295712172434091,0.472763092328763,1.56215619722769,0.206686796501184,0.317079050969534,0,0,0,0.879356221798103,0,0,0,0,0,0.443511850813194,0.230467975111559,2.57232014156128,0.40781839786099,0.328863867814245,0.236387681767936,0.889851215136553,0.39246546425257,0.157115589916002,0,1.82631744101899,0.647782773655864,0,0.357382720883282,0.632054446930906,0.929931402945002,0,0.801711364730253,0.207216164163037,0,0,1.72090943528111,0.236664001461131,0.255640214277473,0.423387050190929,1.14553434272025,0,0,0,1.07965256976767,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.22589216407792,2.19881033490858,0.452888530700021,0.0771741581079447,0.218559560503957,0.940634592723046,4.4126697915703,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,0.399764623699716,0.178553938605658,0.352894871715692,0.240724100067505,0.730336388246517,0.458729283404541,0.143339583151451,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,1.65833887891756,0.103432995861895,0.639701945702943,0,0,0.186224142887574,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0.134704106029175,0.215166616178029,0.332660356546013,0.162806537221949,0.640364075266293,1.9307228228694,0,2.34640942403454,4.03396765803459,0,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.710846162437108,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.886917589850256,0.087834785693126,1.0478326039817,0,0,0,0,0,1.43094374583205,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,7.75560528296651,0,0,0.12663051166458,0,1.72101972449288,0,1.12135520028461,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0.336672227908132,0.625592599359821,0,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0.161646056818812,0,0.302256294682921,0,0.386521706326594,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,1.1240175325762,1.00528972411631,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0.414656231081544,0,0,0,0,0,0,0.205654985406647,0,0,0.336393253036082,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0.0920809889358963,0,0.364182336013434,0.655622074797121,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.183138929636687,0.907604499126468,0,0,0,0,0.154048617114644,0,0.275673144969061,0.322260734604821,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0.185803175125719,0,0.142283686696828,0,0.798317485731266,0,0.423347165447766,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,4.83031449570902,0.23874448473769,0,0.614321404198464,0,0.562677665642051,0,0.16480387422676,1.47787785689595,2.78947183551498,0.552567831062295,0.755798243562828,0.102268682502155,0.123084805461069,0,0,1.07412704805365,0,1.7755813014648,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,1.137934482855,0,0.236387681767936,0.689486746482929,0.874813840149763,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,0.923403102045565,0,0,0.538545866458633,0,0,0,0.533034776018635,0,0.156980256395025,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0.326465616318295,0.424059214301822,0,0.995261931078505,1.94606641907346,0.611030144933625,0,0.123563938946503,0.104421949505455,0.202203398942031,0.802577647298789,0,0.729819156862664,0.19566461893209,0.728341138602278,1.97292201424695,0,0.61214552326098,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.284609546029793,0.277349346026277,0,0.783939179315021,0,0.52418000472609,0.51595809741485,0.580537987734511,0.219267951258557,0.246346371159628,0.290967049465258,0.176512253383001,0,0.137041924646751,0,0.316553979779393,0,0,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0.576219191952599,0.49701014226173,0,0.271808412147228,0.209205692624666,0,0.577901179803038,0.600420288709789,0,1.27746588066972,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0.720599767084807,3.49487848582361,0,0,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0.83088067605837,0.2249738915515,0,0.485996453264197,0,0,0,0.316801009558219,0.35857467866569,0.767660789277781,0,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0.339936274560377,0,0,0.387848869084652,0.66116300871345,0.171086837884329,0,0,0.628817220398664,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0.886068179966986,0,0.3755727921195,1.14681839138014,0.110929051536852,0.745156835296601,0.138348634936231,0,0.303298235083296,0.856396000634902,0,0.468334905806882,0.144921028610825,0.149254802886874,0,0,0,0.754703705257725,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0.512483037175893,0,0,0.276516872303462,0,0,0.327130788511688,0.982829546539238,0.491545817507439,0,0.39997479170986,0,0,2.27006381426734,0,0.139879507719444,0,0.255788742607303,0.107824811396682,0.314531883711793,0.54604819096007,0.678930119816101,1.06287460050841,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.319267718114302,0,0.504143392443436,0.0691572524642179,0.484426936895553,2.85538840518309,0.490738592505128,0.707818340086442,0.183428598521679,0,0,0,0,0.0752103283492573,1.61364054962816,0.781514011233092,2.09525355585138,0.49131575253029,0.295712172434091,0.472763092328763,1.56215619722769,0.206686796501184,0.317079050969534,0,0,0,0.879356221798103,0,0,0,0,0,0.443511850813194,0.230467975111559,2.57232014156128,0.40781839786099,0.328863867814245,0.236387681767936,0.889851215136553,0.39246546425257,0.157115589916002,0,1.82631744101899,0.647782773655864,0,0.357382720883282,0.632054446930906,0.929931402945002,0,0.801711364730253,0.207216164163037,0,0,1.72090943528111,0.236664001461131,0.255640214277473,0.423387050190929,1.14553434272025,0,0,0,1.07965256976767,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.22589216407792,2.19881033490858,0.452888530700021,0.0771741581079447,0.218559560503957,0.940634592723046,4.4126697915703,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,0.399764623699716,0.178553938605658,0.352894871715692,0.240724100067505,0.730336388246517,0.458729283404541,0.143339583151451,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,1.65833887891756,0.103432995861895,0.639701945702943,0,0,0.186224142887574,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0.134704106029175,0.215166616178029,0.332660356546013,0.162806537221949,0.640364075266293,1.9307228228694,0,2.34640942403454,4.03396765803459,0,1.33151354837103,0.201273793591026,0 | ||
|short_description=p5@NT5DC3 | |short_description=p5@NT5DC3 | ||
}} | }} |
Latest revision as of 22:47, 15 September 2015
Short description: | p5@NT5DC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NT5DC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -364bp_to_ENST00000447799_5end |
EntrezGene: | NT5DC3 |
HGNC: | 30826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 6.59e-07 | 1 |
cranial nerve II | 7.35e-07 | 1 |
cranial nerve | 7.35e-07 | 1 |
nerve trunk | 7.35e-07 | 1 |
nerve connecting eye with brain | 7.35e-07 | 1 |
nerve | 7.35e-07 | 1 |
retinal neural layer | 7.35e-07 | 1 |
presumptive neural retina | 7.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 8.21e-07 | 1 |