FFCP PHASE1:Hg19::chr14:73572416..73572428,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:73572416..73572428,+
|short_description=p20@RBM25
|description=CAGE_peak_20_at_RBM25_5end
|association_with_transcript=-220bp_to_S67071_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58517 | |EntrezGene=58517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23244 | |HGNC=23244 | ||
|TSSclassifier=strong | |||
|UniProt=Q16083 | |UniProt=Q16083 | ||
|association_with_transcript=-220bp_to_S67071_5end | |||
|cluster_id=chr14:73572416..73572428,+ | |||
|coexpression_cluster_id=C119 | |||
|description=CAGE_peak_20_at_RBM25_5end | |||
|id=chr14:73572416..73572428,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.89e-10!140;CL:0002087!5.96e-09!119;CL:0002393!5.01e-08!9;CL:0002397!5.01e-08!9;CL:0000037!1.27e-07!172;CL:0000566!1.27e-07!172;CL:0002032!4.72e-07!165;CL:0000837!4.72e-07!165;CL:0000988!9.40e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.12e-28;3!CL:0000771;2.85e-19;2!CL:0000791;7.48e-18;18!CL:0000789;7.48e-18;18!CL:0002419;7.48e-18;18!CL:0000624;3.36e-14;6!CL:0000084;9.68e-13;25!CL:0000542;1.84e-11;53!CL:0000094;6.72e-11;8!CL:0000625;4.14e-08;11!CL:0000081;4.61e-08;11!CL:0002393;4.06e-07;6!CL:0002397;4.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.30e-28,3;CL:0000825,1.30e-28,3;CL:0000838,1.44e-19,52;CL:0000771,3.44e-19,2;CL:0000542,3.63e-19,53;CL:0000051,3.63e-19,53;CL:0000738,1.03e-18,136;CL:0000791,6.45e-18,18;CL:0000789,6.45e-18,18;CL:0002420,6.45e-18,18;CL:0002419,6.45e-18,18;CL:0000790,6.45e-18,18;CL:0002087,3.37e-15,115;CL:0000037,1.28e-14,168;CL:0000624,2.74e-14,6;CL:0000988,9.85e-14,177;CL:0002032,1.54e-13,161;CL:0000837,1.54e-13,161;CL:0000084,8.72e-13,25;CL:0000827,8.72e-13,25;CL:0002031,1.78e-12,120;CL:0000094,6.95e-11,8;CL:0000625,4.09e-08,11;CL:0000081,4.73e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.48e-18;18!CL:0000051;1.84e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p20@RBM25 | |||
}} | }} |
Latest revision as of 22:47, 15 September 2015
Short description: | p20@RBM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RBM25_5end |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | -220bp_to_S67071_5end |
EntrezGene: | RBM25 |
HGNC: | 23244 |
UniProt: | Q16083 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.30e-28 | 3 |
pro-NK cell | 1.30e-28 | 3 |
lymphoid lineage restricted progenitor cell | 1.44e-19 | 52 |
eosinophil | 3.44e-19 | 2 |
lymphocyte | 3.63e-19 | 53 |
common lymphoid progenitor | 3.63e-19 | 53 |
leukocyte | 1.03e-18 | 136 |
mature alpha-beta T cell | 6.45e-18 | 18 |
alpha-beta T cell | 6.45e-18 | 18 |
immature T cell | 6.45e-18 | 18 |
mature T cell | 6.45e-18 | 18 |
immature alpha-beta T cell | 6.45e-18 | 18 |
nongranular leukocyte | 3.37e-15 | 115 |
hematopoietic stem cell | 1.28e-14 | 168 |
CD4-positive, alpha-beta T cell | 2.74e-14 | 6 |
hematopoietic cell | 9.85e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.54e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-13 | 161 |
T cell | 8.72e-13 | 25 |
pro-T cell | 8.72e-13 | 25 |
hematopoietic lineage restricted progenitor cell | 1.78e-12 | 120 |
granulocyte | 6.95e-11 | 8 |
CD8-positive, alpha-beta T cell | 4.09e-08 | 11 |
blood cell | 4.73e-08 | 11 |