FFCP PHASE1:Hg19::chr2:100721923..100721930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3899 | |EntrezGene=3899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6473 | |HGNC=6473 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZ66 | |UniProt=C9JZ66 | ||
|association_with_transcript=-34bp_to_ENST00000441400_5end | |association_with_transcript=-34bp_to_ENST00000441400_5end | ||
|cluster_id=chr2:100721923..100721930,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_16_at_AFF3_5end | |description=CAGE_peak_16_at_AFF3_5end | ||
|id=chr2:100721923..100721930,- | |id=chr2:100721923..100721930,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!4.70e-20!9;UBERON:0000125!4.70e-20!9;UBERON:0007023!6.88e-20!115;UBERON:0001049!3.41e-17!57;UBERON:0005068!3.41e-17!57;UBERON:0006241!3.41e-17!57;UBERON:0007135!3.41e-17!57;UBERON:0002420!5.81e-16!9;UBERON:0007245!5.81e-16!9;UBERON:0010009!5.81e-16!9;UBERON:0010011!5.81e-16!9;UBERON:0000454!5.81e-16!9;UBERON:0009663!3.59e-15!7;UBERON:0003075!5.54e-15!86;UBERON:0007284!5.54e-15!86;UBERON:0002616!1.07e-14!59;UBERON:0002346!4.80e-14!90;UBERON:0002020!2.11e-13!34;UBERON:0003528!2.11e-13!34;UBERON:0005743!2.83e-13!86;UBERON:0000955!4.08e-13!69;UBERON:0006238!4.08e-13!69;UBERON:0001017!8.41e-13!82;UBERON:0000073!1.07e-12!94;UBERON:0001016!1.07e-12!94;UBERON:0002780!1.60e-12!41;UBERON:0001890!1.60e-12!41;UBERON:0006240!1.60e-12!41;UBERON:0003080!3.78e-12!42;UBERON:0002791!7.39e-12!33;UBERON:0001893!1.96e-11!34;UBERON:0003056!2.63e-11!61;UBERON:0006331!1.15e-09!3;UBERON:0000033!1.24e-08!123;UBERON:0001869!1.26e-08!32;UBERON:0000153!5.66e-08!129;UBERON:0007811!5.66e-08!129;UBERON:0002680!7.81e-08!9;UBERON:0001895!7.81e-08!9;UBERON:0010092!7.81e-08!9;UBERON:0001875!1.40e-07!2;UBERON:0006514!1.40e-07!2;UBERON:0001897!1.70e-07!2;UBERON:0004121!2.84e-07!169;UBERON:0000924!5.81e-07!173;UBERON:0006601!5.81e-07!173;UBERON:0000369!8.44e-07!4;UBERON:0002435!8.44e-07!4;UBERON:0000204!8.44e-07!4;UBERON:0010082!8.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0007625;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.03e-17,4;UBERON:0005389,1.03e-17,4;UBERON:0000484,1.03e-17,4;UBERON:0002546,1.03e-17,4;UBERON:0000965,1.03e-17,4;UBERON:0001803,1.03e-17,4;UBERON:0003073,1.03e-17,4;UBERON:0005426,1.03e-17,4;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0000076,1.47e-09,8;UBERON:0007625,2.63e-07,11 | |||
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| ||
|short_description=p16@AFF3 | |short_description=p16@AFF3 | ||
}} | }} |
Latest revision as of 22:40, 15 September 2015
Short description: | p16@AFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_AFF3_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | -34bp_to_ENST00000441400_5end |
EntrezGene: | AFF3 |
HGNC: | 6473 |
UniProt: | C9JZ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.03e-17 | 4 |
vertebrate lens cell | 1.03e-17 | 4 |
lens epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.03e-17 | 4 |
transparent eye structure | 1.03e-17 | 4 |
simple cuboidal epithelium | 1.03e-17 | 4 |
cranial placode | 1.03e-17 | 4 |
lens of camera-type eye | 1.03e-17 | 4 |
epithelium of lens | 1.03e-17 | 4 |
lens placode | 1.03e-17 | 4 |
lens vesicle | 1.03e-17 | 4 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
external ectoderm | 1.47e-09 | 8 |
pigment epithelium of eye | 2.63e-07 | 11 |