FFCP PHASE1:Hg19::chr1:110162522..110162535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=271 | |EntrezGene=271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=469 | |HGNC=469 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000528667_5end | |association_with_transcript=15bp_to_ENST00000528667_5end | ||
|cluster_id=chr1:110162522..110162535,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_AMPD2_5end | |description=CAGE_peak_4_at_AMPD2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!9.91e-26!42;CL:0000860!8.59e-23!45;CL:0000048!1.54e-17!430;CL:0000723!4.03e-17!436;CL:0000034!4.86e-17!444;CL:0000766!6.61e-17!76;CL:0000144!8.98e-14!625;CL:0002194!1.71e-13!63;CL:0000576!1.71e-13!63;CL:0000040!1.71e-13!63;CL:0000559!1.71e-13!63;CL:0002009!2.72e-13!65;CL:0000557!6.82e-13!71;CL:0002371!4.02e-12!591;CL:0000839!2.34e-11!70;CL:0002320!2.53e-11!365;CL:0000134!4.72e-11!358;CL:0000219!6.40e-10!390;CL:0000763!2.17e-09!112;CL:0000049!2.17e-09!112;CL:0000192!4.60e-09!42;CL:0000514!4.60e-09!42;CL:0000055!4.95e-09!180;CL:0000183!1.88e-08!59;CL:0000680!2.86e-08!57;CL:0000056!2.86e-08!57;CL:0000355!2.86e-08!57;CL:0000187!4.58e-08!54;CL:0000012!5.47e-08!682;CL:0000548!1.20e-07!679;CL:0000004!1.20e-07!679;CL:0000255!1.20e-07!679;CL:0000359!3.64e-07!32;CL:0000094!5.15e-07!8;CL:0000393!5.56e-07!60;CL:0000211!5.56e-07!60;CL:0002393!8.60e-07!9;CL:0002397!8.60e-07!9 | |ontology_enrichment_celltype=CL:0002057!9.91e-26!42;CL:0000860!8.59e-23!45;CL:0000048!1.54e-17!430;CL:0000723!4.03e-17!436;CL:0000034!4.86e-17!444;CL:0000766!6.61e-17!76;CL:0000144!8.98e-14!625;CL:0002194!1.71e-13!63;CL:0000576!1.71e-13!63;CL:0000040!1.71e-13!63;CL:0000559!1.71e-13!63;CL:0002009!2.72e-13!65;CL:0000557!6.82e-13!71;CL:0002371!4.02e-12!591;CL:0000839!2.34e-11!70;CL:0002320!2.53e-11!365;CL:0000134!4.72e-11!358;CL:0000219!6.40e-10!390;CL:0000763!2.17e-09!112;CL:0000049!2.17e-09!112;CL:0000192!4.60e-09!42;CL:0000514!4.60e-09!42;CL:0000055!4.95e-09!180;CL:0000183!1.88e-08!59;CL:0000680!2.86e-08!57;CL:0000056!2.86e-08!57;CL:0000355!2.86e-08!57;CL:0000187!4.58e-08!54;CL:0000012!5.47e-08!682;CL:0000548!1.20e-07!679;CL:0000004!1.20e-07!679;CL:0000255!1.20e-07!679;CL:0000359!3.64e-07!32;CL:0000094!5.15e-07!8;CL:0000393!5.56e-07!60;CL:0000211!5.56e-07!60;CL:0002393!8.60e-07!9;CL:0002397!8.60e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-30;33!CL:0002057;3.46e-30;33!CL:0000576;1.38e-21;48!CL:0000473;5.35e-20;39!CL:0000234;5.35e-20;39!CL:0000766;2.36e-16;69!CL:0000094;6.58e-11;8!CL:0000763;1.27e-07;100!CL:0000359;1.76e-07;32!CL:0002393;1.85e-07;6!CL:0002397;1.85e-07;6!CL:0000081;3.17e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;3.46e-30;33!CL:0002057;3.46e-30;33!CL:0000576;1.38e-21;48!CL:0000473;5.35e-20;39!CL:0000234;5.35e-20;39!CL:0000766;2.36e-16;69!CL:0000094;6.58e-11;8!CL:0000763;1.27e-07;100!CL:0000359;1.76e-07;32!CL:0002393;1.85e-07;6!CL:0002397;1.85e-07;6!CL:0000081;3.17e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.50e-43,42;CL:0002057,8.50e-43,42;CL:0000473,3.15e-35,48;CL:0000234,3.15e-35,48;CL:0000766,5.79e-32,72;CL:0002009,3.25e-26,61;CL:0002194,4.50e-26,59;CL:0000576,4.50e-26,59;CL:0000040,4.50e-26,59;CL:0000559,4.50e-26,59;CL:0000557,4.08e-25,67;CL:0000839,9.87e-23,66;CL:0000763,2.15e-19,108;CL:0000049,2.15e-19,108;CL:0000048,3.95e-18,427;CL:0000034,8.62e-18,441;CL:0000723,9.51e-18,433;CL:0000738,7.77e-16,136;CL:0000134,2.74e-13,354;CL:0002320,9.41e-13,361;CL:0002087,1.19e-12,115;CL:0000037,5.79e-12,168;CL:0000988,2.63e-11,177;CL:0000094,7.51e-11,8;CL:0000219,7.77e-11,386;CL:0002032,8.86e-11,161;CL:0000837,8.86e-11,161;CL:0002031,1.17e-10,120;CL:0002393,1.79e-10,9;CL:0002397,1.79e-10,9;CL:0000192,1.65e-08,43;CL:0000514,1.65e-08,43;CL:0000359,2.25e-07,32;CL:0000081,3.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-30;42!CL:0000049;5.05e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.09e-30;42!CL:0000049;5.05e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.52e-17!167;UBERON:0003081!1.04e-14!216;UBERON:0002371!7.31e-14!80;UBERON:0001474!9.84e-14!86;UBERON:0002390!7.53e-13!102;UBERON:0003061!7.53e-13!102;UBERON:0002384!4.57e-12!375;UBERON:0002193!9.04e-11!112;UBERON:0002405!3.66e-10!115;UBERON:0004765!4.04e-10!101;UBERON:0001434!4.04e-10!101;UBERON:0000926!6.88e-10!448;UBERON:0004120!6.88e-10!448;UBERON:0006603!6.88e-10!448;UBERON:0004290!3.79e-09!70;UBERON:0001134!8.56e-08!61;UBERON:0002036!8.56e-08!61;UBERON:0003082!8.56e-08!61;UBERON:0002385!2.51e-07!63;UBERON:0001015!2.51e-07!63;UBERON:0000383!2.51e-07!63;UBERON:0000914!3.42e-07!83;UBERON:0002329!3.42e-07!83;UBERON:0003077!3.42e-07!83;UBERON:0003059!3.42e-07!83;UBERON:0007282!3.42e-07!83;UBERON:0009618!3.42e-07!83;UBERON:0007285!3.42e-07!83;UBERON:0001637!4.83e-07!42;UBERON:0003509!4.83e-07!42;UBERON:0004572!4.83e-07!42 | |ontology_enrichment_uberon=UBERON:0002204!5.52e-17!167;UBERON:0003081!1.04e-14!216;UBERON:0002371!7.31e-14!80;UBERON:0001474!9.84e-14!86;UBERON:0002390!7.53e-13!102;UBERON:0003061!7.53e-13!102;UBERON:0002384!4.57e-12!375;UBERON:0002193!9.04e-11!112;UBERON:0002405!3.66e-10!115;UBERON:0004765!4.04e-10!101;UBERON:0001434!4.04e-10!101;UBERON:0000926!6.88e-10!448;UBERON:0004120!6.88e-10!448;UBERON:0006603!6.88e-10!448;UBERON:0004290!3.79e-09!70;UBERON:0001134!8.56e-08!61;UBERON:0002036!8.56e-08!61;UBERON:0003082!8.56e-08!61;UBERON:0002385!2.51e-07!63;UBERON:0001015!2.51e-07!63;UBERON:0000383!2.51e-07!63;UBERON:0000914!3.42e-07!83;UBERON:0002329!3.42e-07!83;UBERON:0003077!3.42e-07!83;UBERON:0003059!3.42e-07!83;UBERON:0007282!3.42e-07!83;UBERON:0009618!3.42e-07!83;UBERON:0007285!3.42e-07!83;UBERON:0001637!4.83e-07!42;UBERON:0003509!4.83e-07!42;UBERON:0004572!4.83e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.49e-07;33!UBERON:0004571;5.49e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004573;5.49e-07;33!UBERON:0004571;5.49e-07;33 | ||
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| ||
|short_description=p4@AMPD2 | |short_description=p4@AMPD2 | ||
}} | }} |
Latest revision as of 22:29, 15 September 2015
Short description: | p4@AMPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AMPD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 15bp_to_ENST00000528667_5end |
EntrezGene: | AMPD2 |
HGNC: | 469 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.41e-25 | 82 |
bone marrow | 1.84e-25 | 76 |
hematopoietic system | 2.56e-23 | 98 |
blood island | 2.56e-23 | 98 |
lateral plate mesoderm | 7.17e-23 | 203 |
skeletal element | 2.01e-22 | 90 |
musculoskeletal system | 4.95e-22 | 167 |
hemolymphoid system | 2.66e-19 | 108 |
skeletal system | 2.62e-18 | 100 |
mesoderm | 1.14e-17 | 315 |
mesoderm-derived structure | 1.14e-17 | 315 |
presumptive mesoderm | 1.14e-17 | 315 |
immune system | 1.52e-17 | 93 |
connective tissue | 9.18e-14 | 371 |
systemic artery | 7.95e-08 | 33 |
systemic arterial system | 7.95e-08 | 33 |
artery | 3.67e-07 | 42 |
arterial blood vessel | 3.67e-07 | 42 |
arterial system | 3.67e-07 | 42 |