FFCP PHASE1:Hg19::chr1:223900302..223900328,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |||
|TSSclassifier=strong | |||
|UniProt=P17655,Q59EF6 | |||
|association_with_transcript=183bp_to_NM_001748,uc001hob.3_5end | |||
|cluster_id=chr1:223900302..223900328,+ | |||
|coexpression_cluster_id=C2570 | |||
|description=CAGE_peak_2_at_CAPN2_5end | |||
|id=chr1:223900302..223900328,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.39e-18!679;CL:0000004!1.39e-18!679;CL:0000255!1.39e-18!679;CL:0002371!8.98e-18!591;CL:0000012!1.04e-17!682;CL:0000055!2.06e-17!180;CL:0000144!2.30e-16!625;CL:0000222!2.58e-13!119;CL:0002057!9.90e-13!42;CL:0000680!1.68e-12!57;CL:0000056!1.68e-12!57;CL:0000355!1.68e-12!57;CL:0000359!3.26e-12!32;CL:0000057!9.71e-12!75;CL:0000860!1.08e-11!45;CL:0000192!2.04e-11!42;CL:0000514!2.04e-11!42;CL:0000003!2.30e-11!722;CL:0000187!2.36e-11!54;CL:0000183!3.95e-10!59;CL:0000220!4.79e-10!246;CL:0002321!1.95e-09!248;CL:0000063!1.01e-08!578;CL:0000393!3.88e-08!60;CL:0000211!3.88e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-14;33!CL:0002057;1.18e-14;33!CL:0000359;1.45e-11;32!CL:0000192;6.96e-09;43!CL:0000473;2.17e-08;39!CL:0000234;2.17e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.41e-13,121;CL:0000680,5.48e-13,58;CL:0000056,5.48e-13,58;CL:0000355,5.48e-13,58;CL:0000860,9.85e-13,42;CL:0002057,9.85e-13,42;CL:0000359,3.25e-12,32;CL:0000057,5.84e-12,76;CL:0000192,6.35e-12,43;CL:0000514,6.35e-12,43;CL:0000187,7.89e-12,55;CL:0002321,1.21e-09,250;CL:0000473,4.99e-09,48;CL:0000234,4.99e-09,48;CL:0000393,1.56e-08,61;CL:0000211,1.56e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;9.21e-10;42!CL:0000514;6.96e-09;43!CL:0000355;5.94e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.97e-19!448;UBERON:0004120!2.97e-19!448;UBERON:0006603!2.97e-19!448;UBERON:0000914!1.30e-16!83;UBERON:0002329!1.30e-16!83;UBERON:0003077!1.30e-16!83;UBERON:0003059!1.30e-16!83;UBERON:0007282!1.30e-16!83;UBERON:0009618!1.30e-16!83;UBERON:0007285!1.30e-16!83;UBERON:0002204!2.23e-15!167;UBERON:0000486!4.36e-15!82;UBERON:0000480!3.35e-14!626;UBERON:0004290!4.01e-14!70;UBERON:0000467!4.18e-14!625;UBERON:0000468!3.66e-13!659;UBERON:0001637!6.73e-13!42;UBERON:0003509!6.73e-13!42;UBERON:0004572!6.73e-13!42;UBERON:0002049!2.05e-12!79;UBERON:0007798!2.05e-12!79;UBERON:0001981!5.46e-12!60;UBERON:0007500!5.46e-12!60;UBERON:0004537!5.46e-12!60;UBERON:0006965!5.46e-12!60;UBERON:0001134!6.83e-12!61;UBERON:0002036!6.83e-12!61;UBERON:0003082!6.83e-12!61;UBERON:0005256!1.22e-11!143;UBERON:0002385!1.73e-11!63;UBERON:0001015!1.73e-11!63;UBERON:0000383!1.73e-11!63;UBERON:0000923!2.19e-11!604;UBERON:0005291!2.19e-11!604;UBERON:0006598!2.19e-11!604;UBERON:0002532!2.19e-11!604;UBERON:0002050!2.45e-11!605;UBERON:0005423!2.45e-11!605;UBERON:0004872!4.72e-11!84;UBERON:0003081!8.13e-11!216;UBERON:0000055!2.15e-10!69;UBERON:0003102!3.35e-10!95;UBERON:0004573!6.66e-10!33;UBERON:0004571!6.66e-10!33;UBERON:0000490!1.08e-09!138;UBERON:0000922!1.10e-09!612;UBERON:0002100!3.28e-09!216;UBERON:0004535!3.35e-08!110;UBERON:0003914!4.83e-08!118;UBERON:0001009!7.16e-08!113;UBERON:0003104!1.16e-07!238;UBERON:0009142!1.16e-07!238;UBERON:0000947!6.22e-07!21;UBERON:0010191!6.22e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.36e-09;42!UBERON:0003509;3.36e-09;42!UBERON:0004572;3.36e-09;42!UBERON:0004573;4.53e-09;33!UBERON:0004571;4.53e-09;33!UBERON:0007500;1.71e-07;56!UBERON:0001981;1.71e-07;56!UBERON:0004537;1.71e-07;56!UBERON:0000947;6.43e-07;21!UBERON:0010191;6.43e-07;21 | |||
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| |||
|short_description=p2@CAPN2 | |||
}} |
Latest revision as of 22:18, 15 September 2015
Short description: | p2@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPN2_5end |
Coexpression cluster: | C2570_mesenchymal_leiomyoma_Fibroblast_CD14_Mesothelial_Gingival_meningioma |
Association with transcript: | 183bp_to_NM_001748, uc001hob.3_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | P17655Q59EF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.41e-13 | 121 |
muscle precursor cell | 5.48e-13 | 58 |
myoblast | 5.48e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.48e-13 | 58 |
classical monocyte | 9.85e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.85e-13 | 42 |
vascular associated smooth muscle cell | 3.25e-12 | 32 |
fibroblast | 5.84e-12 | 76 |
smooth muscle cell | 6.35e-12 | 43 |
smooth muscle myoblast | 6.35e-12 | 43 |
muscle cell | 7.89e-12 | 55 |
embryonic cell | 1.21e-09 | 250 |
defensive cell | 4.99e-09 | 48 |
phagocyte | 4.99e-09 | 48 |
electrically responsive cell | 1.56e-08 | 61 |
electrically active cell | 1.56e-08 | 61 |