FFCP PHASE1:Hg19::chr1:223900286..223900299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |EntrezGene=824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |HGNC=1479 | ||
|TSSclassifier=strong | |||
|UniProt=P17655,Q59EF6 | |UniProt=P17655,Q59EF6 | ||
|association_with_transcript=167bp_to_NM_001748,uc001hob.3_5end | |association_with_transcript=167bp_to_NM_001748,uc001hob.3_5end | ||
|cluster_id=chr1:223900286..223900299,+ | |||
|coexpression_cluster_id=C2570 | |coexpression_cluster_id=C2570 | ||
|description=CAGE_peak_4_at_CAPN2_5end | |description=CAGE_peak_4_at_CAPN2_5end | ||
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|ontology_enrichment_celltype=CL:0000548!5.95e-22!679;CL:0000004!5.95e-22!679;CL:0000255!5.95e-22!679;CL:0002371!1.67e-21!591;CL:0000012!5.50e-21!682;CL:0000144!1.32e-20!625;CL:0000055!2.01e-18!180;CL:0000003!1.17e-16!722;CL:0000222!3.27e-15!119;CL:0002057!2.99e-14!42;CL:0000860!9.96e-13!45;CL:0000057!1.01e-12!75;CL:0000359!3.27e-12!32;CL:0000680!4.01e-12!57;CL:0000056!4.01e-12!57;CL:0000355!4.01e-12!57;CL:0000220!2.40e-11!246;CL:0000187!6.41e-11!54;CL:0000063!1.06e-10!578;CL:0002321!1.08e-10!248;CL:0000192!1.09e-10!42;CL:0000514!1.09e-10!42;CL:0000183!4.53e-10!59;CL:0000048!7.39e-08!430;CL:0000723!8.78e-08!436;CL:0000393!9.65e-08!60;CL:0000211!9.65e-08!60;CL:0002620!4.84e-07!23 | |ontology_enrichment_celltype=CL:0000548!5.95e-22!679;CL:0000004!5.95e-22!679;CL:0000255!5.95e-22!679;CL:0002371!1.67e-21!591;CL:0000012!5.50e-21!682;CL:0000144!1.32e-20!625;CL:0000055!2.01e-18!180;CL:0000003!1.17e-16!722;CL:0000222!3.27e-15!119;CL:0002057!2.99e-14!42;CL:0000860!9.96e-13!45;CL:0000057!1.01e-12!75;CL:0000359!3.27e-12!32;CL:0000680!4.01e-12!57;CL:0000056!4.01e-12!57;CL:0000355!4.01e-12!57;CL:0000220!2.40e-11!246;CL:0000187!6.41e-11!54;CL:0000063!1.06e-10!578;CL:0002321!1.08e-10!248;CL:0000192!1.09e-10!42;CL:0000514!1.09e-10!42;CL:0000183!4.53e-10!59;CL:0000048!7.39e-08!430;CL:0000723!8.78e-08!436;CL:0000393!9.65e-08!60;CL:0000211!9.65e-08!60;CL:0002620!4.84e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-15;33!CL:0002057;2.11e-15;33!CL:0000359;8.64e-12;32!CL:0000473;8.12e-09;39!CL:0000234;8.12e-09;39!CL:0000192;2.15e-08;43!CL:0002620;3.84e-07;23 | |ontology_enrichment_celltype_v019=CL:0000860;2.11e-15;33!CL:0002057;2.11e-15;33!CL:0000359;8.64e-12;32!CL:0000473;8.12e-09;39!CL:0000234;8.12e-09;39!CL:0000192;2.15e-08;43!CL:0002620;3.84e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.62e-15,121;CL:0000860,2.53e-14,42;CL:0002057,2.53e-14,42;CL:0000057,6.15e-13,76;CL:0000680,2.19e-12,58;CL:0000056,2.19e-12,58;CL:0000355,2.19e-12,58;CL:0000359,2.85e-12,32;CL:0000187,3.57e-11,55;CL:0000192,6.11e-11,43;CL:0000514,6.11e-11,43;CL:0002321,7.97e-11,250;CL:0000473,4.32e-10,48;CL:0000234,4.32e-10,48;CL:0000048,4.94e-09,427;CL:0000723,5.74e-09,433;CL:0000393,4.39e-08,61;CL:0000211,4.39e-08,61;CL:0000034,2.87e-07,441;CL:0002620,4.50e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;8.40e-11;42!CL:0000514;2.15e-08;43 | |ontology_enrichment_development_v019=CL:0002057;8.40e-11;42!CL:0000514;2.15e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.58e-18!448;UBERON:0004120!4.58e-18!448;UBERON:0006603!4.58e-18!448;UBERON:0000914!4.20e-16!83;UBERON:0002329!4.20e-16!83;UBERON:0003077!4.20e-16!83;UBERON:0003059!4.20e-16!83;UBERON:0007282!4.20e-16!83;UBERON:0009618!4.20e-16!83;UBERON:0007285!4.20e-16!83;UBERON:0000486!3.49e-15!82;UBERON:0002204!8.38e-15!167;UBERON:0001637!1.48e-14!42;UBERON:0003509!1.48e-14!42;UBERON:0004572!1.48e-14!42;UBERON:0004290!3.62e-14!70;UBERON:0002049!2.29e-13!79;UBERON:0007798!2.29e-13!79;UBERON:0001981!5.64e-13!60;UBERON:0007500!5.64e-13!60;UBERON:0004537!5.64e-13!60;UBERON:0006965!5.64e-13!60;UBERON:0003081!4.41e-12!216;UBERON:0000055!1.66e-11!69;UBERON:0004872!2.21e-11!84;UBERON:0000480!2.53e-11!626;UBERON:0000467!2.80e-11!625;UBERON:0004573!3.49e-11!33;UBERON:0004571!3.49e-11!33;UBERON:0001134!4.62e-11!61;UBERON:0002036!4.62e-11!61;UBERON:0003082!4.62e-11!61;UBERON:0002385!2.65e-10!63;UBERON:0001015!2.65e-10!63;UBERON:0000383!2.65e-10!63;UBERON:0005256!2.79e-10!143;UBERON:0000468!1.27e-09!659;UBERON:0004535!1.75e-09!110;UBERON:0000490!1.95e-09!138;UBERON:0003102!2.71e-09!95;UBERON:0001009!6.18e-09!113;UBERON:0002100!1.65e-08!216;UBERON:0000923!5.18e-08!604;UBERON:0005291!5.18e-08!604;UBERON:0006598!5.18e-08!604;UBERON:0002532!5.18e-08!604;UBERON:0002050!6.30e-08!605;UBERON:0005423!6.30e-08!605;UBERON:0003914!7.29e-08!118;UBERON:0000947!1.55e-07!21;UBERON:0010191!1.55e-07!21 | |ontology_enrichment_uberon=UBERON:0000926!4.58e-18!448;UBERON:0004120!4.58e-18!448;UBERON:0006603!4.58e-18!448;UBERON:0000914!4.20e-16!83;UBERON:0002329!4.20e-16!83;UBERON:0003077!4.20e-16!83;UBERON:0003059!4.20e-16!83;UBERON:0007282!4.20e-16!83;UBERON:0009618!4.20e-16!83;UBERON:0007285!4.20e-16!83;UBERON:0000486!3.49e-15!82;UBERON:0002204!8.38e-15!167;UBERON:0001637!1.48e-14!42;UBERON:0003509!1.48e-14!42;UBERON:0004572!1.48e-14!42;UBERON:0004290!3.62e-14!70;UBERON:0002049!2.29e-13!79;UBERON:0007798!2.29e-13!79;UBERON:0001981!5.64e-13!60;UBERON:0007500!5.64e-13!60;UBERON:0004537!5.64e-13!60;UBERON:0006965!5.64e-13!60;UBERON:0003081!4.41e-12!216;UBERON:0000055!1.66e-11!69;UBERON:0004872!2.21e-11!84;UBERON:0000480!2.53e-11!626;UBERON:0000467!2.80e-11!625;UBERON:0004573!3.49e-11!33;UBERON:0004571!3.49e-11!33;UBERON:0001134!4.62e-11!61;UBERON:0002036!4.62e-11!61;UBERON:0003082!4.62e-11!61;UBERON:0002385!2.65e-10!63;UBERON:0001015!2.65e-10!63;UBERON:0000383!2.65e-10!63;UBERON:0005256!2.79e-10!143;UBERON:0000468!1.27e-09!659;UBERON:0004535!1.75e-09!110;UBERON:0000490!1.95e-09!138;UBERON:0003102!2.71e-09!95;UBERON:0001009!6.18e-09!113;UBERON:0002100!1.65e-08!216;UBERON:0000923!5.18e-08!604;UBERON:0005291!5.18e-08!604;UBERON:0006598!5.18e-08!604;UBERON:0002532!5.18e-08!604;UBERON:0002050!6.30e-08!605;UBERON:0005423!6.30e-08!605;UBERON:0003914!7.29e-08!118;UBERON:0000947!1.55e-07!21;UBERON:0010191!1.55e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-10;42!UBERON:0003509;1.16e-10;42!UBERON:0004572;1.16e-10;42!UBERON:0004573;2.23e-10;33!UBERON:0004571;2.23e-10;33!UBERON:0007500;2.65e-08;56!UBERON:0001981;2.65e-08;56!UBERON:0004537;2.65e-08;56!UBERON:0000947;1.22e-07;21!UBERON:0010191;1.22e-07;21!UBERON:0002049;8.57e-07;75!UBERON:0007798;8.57e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-10;42!UBERON:0003509;1.16e-10;42!UBERON:0004572;1.16e-10;42!UBERON:0004573;2.23e-10;33!UBERON:0004571;2.23e-10;33!UBERON:0007500;2.65e-08;56!UBERON:0001981;2.65e-08;56!UBERON:0004537;2.65e-08;56!UBERON:0000947;1.22e-07;21!UBERON:0010191;1.22e-07;21!UBERON:0002049;8.57e-07;75!UBERON:0007798;8.57e-07;75 | ||
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| ||
|short_description=p4@CAPN2 | |short_description=p4@CAPN2 | ||
}} | }} |
Latest revision as of 22:16, 15 September 2015
Short description: | p4@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPN2_5end |
Coexpression cluster: | C2570_mesenchymal_leiomyoma_Fibroblast_CD14_Mesothelial_Gingival_meningioma |
Association with transcript: | 167bp_to_NM_001748, uc001hob.3_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | P17655Q59EF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.62e-15 | 121 |
classical monocyte | 2.53e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.53e-14 | 42 |
fibroblast | 6.15e-13 | 76 |
muscle precursor cell | 2.19e-12 | 58 |
myoblast | 2.19e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.19e-12 | 58 |
vascular associated smooth muscle cell | 2.85e-12 | 32 |
muscle cell | 3.57e-11 | 55 |
smooth muscle cell | 6.11e-11 | 43 |
smooth muscle myoblast | 6.11e-11 | 43 |
embryonic cell | 7.97e-11 | 250 |
defensive cell | 4.32e-10 | 48 |
phagocyte | 4.32e-10 | 48 |
multi fate stem cell | 4.94e-09 | 427 |
somatic stem cell | 5.74e-09 | 433 |
electrically responsive cell | 4.39e-08 | 61 |
electrically active cell | 4.39e-08 | 61 |
stem cell | 2.87e-07 | 441 |
skin fibroblast | 4.50e-07 | 23 |