FFCP PHASE1:Hg19::chr19:13051152..13051172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK130190_5end | |association_with_transcript=0bp_to_AK130190_5end | ||
|cluster_id=chr19:13051152..13051172,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_8_at_CALR_5end | |description=CAGE_peak_8_at_CALR_5end | ||
|id=chr19:13051152..13051172,+ | |id=chr19:13051152..13051172,+ | ||
|ontology_enrichment_celltype=CL:0000548!7.21e-19!679;CL:0000004!7.21e-19!679;CL:0000255!7.21e-19!679;CL:0000012!2.06e-18!682;CL:0000144!1.91e-16!625;CL:0002371!6.32e-15!591;CL:0000055!6.91e-14!180;CL:0000003!6.72e-10!722;CL:0000723!1.03e-09!436;CL:0000034!1.09e-09!444;CL:0000048!1.58e-09!430;CL:0002321!1.43e-08!248;CL:0000220!1.64e-08!246;CL:0000057!2.81e-08!75;CL:0000063!3.26e-08!578;CL:0000222!1.22e-07!119;CL:0000192!3.51e-07!42;CL:0000514!3.51e-07!42;CL:0000183!6.10e-07!59 | |ontology_enrichment_celltype=CL:0000548!7.21e-19!679;CL:0000004!7.21e-19!679;CL:0000255!7.21e-19!679;CL:0000012!2.06e-18!682;CL:0000144!1.91e-16!625;CL:0002371!6.32e-15!591;CL:0000055!6.91e-14!180;CL:0000003!6.72e-10!722;CL:0000723!1.03e-09!436;CL:0000034!1.09e-09!444;CL:0000048!1.58e-09!430;CL:0002321!1.43e-08!248;CL:0000220!1.64e-08!246;CL:0000057!2.81e-08!75;CL:0000063!3.26e-08!578;CL:0000222!1.22e-07!119;CL:0000192!3.51e-07!42;CL:0000514!3.51e-07!42;CL:0000183!6.10e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,7.63e-10,433;CL:0000034,8.23e-10,441;CL:0000048,1.17e-09,427;CL:0002321,5.65e-09,250;CL:0000057,1.57e-08,76;CL:0000222,7.25e-08,121;CL:0000192,4.20e-07,43;CL:0000514,4.20e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.15e-08!143;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0001637!2.38e-07!42;UBERON:0003509!2.38e-07!42;UBERON:0004572!2.38e-07!42;UBERON:0000490!5.57e-07!138;UBERON:0000055!5.95e-07!69;UBERON:0000914!7.26e-07!83;UBERON:0002329!7.26e-07!83;UBERON:0003077!7.26e-07!83;UBERON:0003059!7.26e-07!83;UBERON:0007282!7.26e-07!83;UBERON:0009618!7.26e-07!83;UBERON:0007285!7.26e-07!83;UBERON:0003914!9.16e-07!118 | |ontology_enrichment_uberon=UBERON:0005256!5.15e-08!143;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0001637!2.38e-07!42;UBERON:0003509!2.38e-07!42;UBERON:0004572!2.38e-07!42;UBERON:0000490!5.57e-07!138;UBERON:0000055!5.95e-07!69;UBERON:0000914!7.26e-07!83;UBERON:0002329!7.26e-07!83;UBERON:0003077!7.26e-07!83;UBERON:0003059!7.26e-07!83;UBERON:0007282!7.26e-07!83;UBERON:0009618!7.26e-07!83;UBERON:0007285!7.26e-07!83;UBERON:0003914!9.16e-07!118 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.12e-08,148;UBERON:0005256,1.04e-07,122;UBERON:0002049,1.23e-07,78;UBERON:0007798,1.23e-07,78;UBERON:0001637,1.98e-07,42;UBERON:0003509,1.98e-07,42;UBERON:0004572,1.98e-07,42;UBERON:0007503,4.84e-07,78;UBERON:0003914,5.53e-07,117;UBERON:0000055,6.19e-07,68 | |||
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| ||
|short_description=p8@CALR | |short_description=p8@CALR | ||
}} | }} |
Latest revision as of 22:14, 15 September 2015
Short description: | p8@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | 0bp_to_AK130190_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 7.63e-10 | 433 |
stem cell | 8.23e-10 | 441 |
multi fate stem cell | 1.17e-09 | 427 |
embryonic cell | 5.65e-09 | 250 |
fibroblast | 1.57e-08 | 76 |
mesodermal cell | 7.25e-08 | 121 |
smooth muscle cell | 4.20e-07 | 43 |
smooth muscle myoblast | 4.20e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.12e-08 | 148 |
trunk mesenchyme | 1.04e-07 | 122 |
vasculature | 1.23e-07 | 78 |
vascular system | 1.23e-07 | 78 |
artery | 1.98e-07 | 42 |
arterial blood vessel | 1.98e-07 | 42 |
arterial system | 1.98e-07 | 42 |
epithelial vesicle | 4.84e-07 | 78 |
epithelial tube | 5.53e-07 | 117 |
vessel | 6.19e-07 | 68 |