FFCP PHASE1:Hg19::chr2:233415769..233415825,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:233415769..233415825,+
|short_description=p2@EIF4E2
|description=CAGE_peak_2_at_EIF4E2_5end
|association_with_transcript=252bp_to_ENST00000454501_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9470 | |EntrezGene=9470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3293 | |HGNC=3293 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEL3 | |UniProt=C9JEL3 | ||
|association_with_transcript=252bp_to_ENST00000454501_5end | |||
|cluster_id=chr2:233415769..233415825,+ | |||
|description=CAGE_peak_2_at_EIF4E2_5end | |||
|id=chr2:233415769..233415825,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.87e-26!679;CL:0000004!7.87e-26!679;CL:0000255!7.87e-26!679;CL:0000012!1.46e-25!682;CL:0000003!4.16e-23!722;CL:0000144!1.40e-20!625;CL:0002371!1.80e-20!591;CL:0000048!7.05e-13!430;CL:0000723!2.09e-12!436;CL:0000063!5.87e-12!578;CL:0000034!9.25e-12!444;CL:0000055!7.73e-11!180;CL:0000680!1.60e-09!57;CL:0000056!1.60e-09!57;CL:0000355!1.60e-09!57;CL:0000183!1.61e-09!59;CL:0000187!3.27e-09!54;CL:0000393!3.19e-08!60;CL:0000211!3.19e-08!60;CL:0000192!4.17e-08!42;CL:0000514!4.17e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.18e-11,427;CL:0000723,8.61e-11,433;CL:0000034,3.35e-10,441;CL:0000680,3.44e-09,58;CL:0000056,3.44e-09,58;CL:0000355,3.44e-09,58;CL:0000187,7.69e-09,55;CL:0000393,2.23e-08,61;CL:0000211,2.23e-08,61;CL:0000192,1.44e-07,43;CL:0000514,1.44e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.73e-11!83;UBERON:0002329!8.73e-11!83;UBERON:0003077!8.73e-11!83;UBERON:0003059!8.73e-11!83;UBERON:0007282!8.73e-11!83;UBERON:0009618!8.73e-11!83;UBERON:0007285!8.73e-11!83;UBERON:0000486!2.30e-09!82;UBERON:0004290!5.00e-09!70;UBERON:0002204!4.52e-08!167;UBERON:0001134!5.72e-08!61;UBERON:0002036!5.72e-08!61;UBERON:0003082!5.72e-08!61;UBERON:0005256!7.46e-08!143;UBERON:0002385!4.93e-07!63;UBERON:0001015!4.93e-07!63;UBERON:0000383!4.93e-07!63;UBERON:0000490!6.04e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,8.22e-09,71;UBERON:0003059,8.22e-09,71;UBERON:0007282,8.22e-09,71;UBERON:0004290,8.22e-09,71;UBERON:0009618,8.22e-09,71;UBERON:0007524,9.98e-09,73;UBERON:0007503,1.54e-08,78;UBERON:0000486,1.74e-08,83;UBERON:0003077,2.01e-08,72;UBERON:0007285,2.01e-08,72;UBERON:0002204,4.86e-08,167;UBERON:0001134,7.83e-08,62;UBERON:0002036,7.83e-08,62;UBERON:0003082,7.83e-08,62;UBERON:0002385,4.42e-07,64;UBERON:0001015,4.42e-07,64;UBERON:0000383,4.42e-07,64;UBERON:0000490,4.80e-07,148 | |||
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| ||
|short_description=p2@EIF4E2 | |||
}} | }} |
Latest revision as of 21:55, 15 September 2015
Short description: | p2@EIF4E2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EIF4E2_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_ENST00000454501_5end |
EntrezGene: | EIF4E2 |
HGNC: | 3293 |
UniProt: | C9JEL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.18e-11 | 427 |
somatic stem cell | 8.61e-11 | 433 |
stem cell | 3.35e-10 | 441 |
muscle precursor cell | 3.44e-09 | 58 |
myoblast | 3.44e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.44e-09 | 58 |
muscle cell | 7.69e-09 | 55 |
electrically responsive cell | 2.23e-08 | 61 |
electrically active cell | 2.23e-08 | 61 |
smooth muscle cell | 1.44e-07 | 43 |
smooth muscle myoblast | 1.44e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
somite | 8.22e-09 | 71 |
presomitic mesoderm | 8.22e-09 | 71 |
presumptive segmental plate | 8.22e-09 | 71 |
dermomyotome | 8.22e-09 | 71 |
trunk paraxial mesoderm | 8.22e-09 | 71 |
dense mesenchyme tissue | 9.98e-09 | 73 |
epithelial vesicle | 1.54e-08 | 78 |
multilaminar epithelium | 1.74e-08 | 83 |
paraxial mesoderm | 2.01e-08 | 72 |
presumptive paraxial mesoderm | 2.01e-08 | 72 |
musculoskeletal system | 4.86e-08 | 167 |
skeletal muscle tissue | 7.83e-08 | 62 |
striated muscle tissue | 7.83e-08 | 62 |
myotome | 7.83e-08 | 62 |
muscle tissue | 4.42e-07 | 64 |
musculature | 4.42e-07 | 64 |
musculature of body | 4.42e-07 | 64 |
unilaminar epithelium | 4.80e-07 | 148 |