FFCP PHASE1:Hg19::chr3:149260294..149260308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000485244_5end | |association_with_transcript=-68bp_to_ENST00000485244_5end | ||
|cluster_id=chr3:149260294..149260308,- | |||
|coexpression_cluster_id=C1922 | |||
|description=CAGE_peak_12_at_WWTR1_5end | |description=CAGE_peak_12_at_WWTR1_5end | ||
|id=chr3:149260294..149260308,- | |id=chr3:149260294..149260308,- | ||
|ontology_enrichment_celltype=CL:0002139!8.11e-14!24;CL:0000222!2.44e-13!119;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:1000507!3.22e-10!12;CL:1000494!3.22e-10!12;CL:0000213!3.62e-10!57;CL:0000215!3.62e-10!57;CL:1000497!5.80e-10!18;CL:0002518!5.80e-10!18;CL:0002078!2.93e-09!44;CL:0000115!2.97e-08!35;CL:1000449!3.05e-08!16;CL:0000220!2.86e-07!246;CL:0002321!4.94e-07!248;CL:0002543!7.75e-07!6 | |ontology_enrichment_celltype=CL:0002139!8.11e-14!24;CL:0000222!2.44e-13!119;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:1000507!3.22e-10!12;CL:1000494!3.22e-10!12;CL:0000213!3.62e-10!57;CL:0000215!3.62e-10!57;CL:1000497!5.80e-10!18;CL:0002518!5.80e-10!18;CL:0002078!2.93e-09!44;CL:0000115!2.97e-08!35;CL:1000449!3.05e-08!16;CL:0000220!2.86e-07!246;CL:0002321!4.94e-07!248;CL:0002543!7.75e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.09e-29;10!CL:1000494;2.09e-29;10!CL:1000497;1.46e-26;17!CL:0002518;1.46e-26;17!CL:1000449;2.22e-24;15!CL:0000071;3.14e-15;18!CL:0002144;1.95e-14;3!CL:0002139;5.19e-14;24!CL:0002681;6.55e-14;12!CL:0002584;6.55e-14;12!CL:0002543;1.05e-12;6!CL:0000650;2.69e-10;2!CL:1000500;2.69e-10;2!CL:1000618;2.69e-10;2!CL:1001318;2.69e-10;2!CL:0002173;2.69e-10;2!CL:0000115;2.35e-08;36!CL:0002078;5.70e-08;45!CL:0000239;1.09e-07;3!CL:1000615;1.09e-07;3!CL:0002306;1.09e-07;3!CL:0002618;2.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.65e-29,10;CL:1000494,1.65e-29,10;CL:1000497,1.26e-26,17;CL:0002518,1.26e-26,17;CL:1000449,1.92e-24,15;CL:0000071,2.27e-15,18;CL:0002546,2.27e-15,18;CL:0002144,1.17e-14,3;CL:0002139,3.87e-14,24;CL:0002681,6.80e-14,12;CL:0002584,6.80e-14,12;CL:0002543,1.16e-12,6;CL:0002078,1.22e-12,45;CL:0000115,4.07e-11,36;CL:0000650,3.66e-10,2;CL:1000500,3.66e-10,2;CL:1000618,3.66e-10,2;CL:1001318,3.66e-10,2;CL:0002173,3.66e-10,2;CL:0000066,1.79e-08,253;CL:0000239,1.11e-07,3;CL:1000615,1.11e-07,3;CL:0002306,1.11e-07,3;CL:0000213,1.14e-07,58;CL:0000215,1.14e-07,58;CL:0002618,2.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.14e-15;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.01e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.17e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.35e-14!118;UBERON:0001986!6.54e-11!18;UBERON:0004638!6.54e-11!18;UBERON:0004852!6.54e-11!18;UBERON:0002049!1.47e-10!79;UBERON:0007798!1.47e-10!79;UBERON:0000055!1.65e-10!69;UBERON:0009773!3.22e-10!12;UBERON:0001231!3.22e-10!12;UBERON:0004810!3.22e-10!12;UBERON:0004872!1.92e-09!84;UBERON:0001981!3.37e-09!60;UBERON:0007500!3.37e-09!60;UBERON:0004537!3.37e-09!60;UBERON:0006965!3.37e-09!60;UBERON:0002100!3.99e-09!216;UBERON:0000483!5.77e-09!309;UBERON:0000119!6.07e-09!312;UBERON:0006555!8.17e-09!17;UBERON:0005103!8.17e-09!17;UBERON:0000083!8.17e-09!17;UBERON:0009201!8.17e-09!17;UBERON:0004819!8.17e-09!17;UBERON:0006553!8.17e-09!17;UBERON:0003074!8.17e-09!17;UBERON:0003060!8.17e-09!17;UBERON:0004535!2.91e-08!110;UBERON:0004211!3.05e-08!16;UBERON:0001285!3.05e-08!16;UBERON:0007684!3.05e-08!16;UBERON:0003220!3.05e-08!16;UBERON:0004208!3.05e-08!16;UBERON:0001009!4.09e-08!113;UBERON:0002113!4.16e-08!27;UBERON:0003918!4.16e-08!27;UBERON:0005095!4.16e-08!27;UBERON:0007687!4.16e-08!27;UBERON:0000080!4.63e-08!18;UBERON:0002120!4.63e-08!18;UBERON:0004875!4.63e-08!18;UBERON:0005721!4.63e-08!18;UBERON:0005754!4.63e-08!18;UBERON:0007297!4.63e-08!18;UBERON:0000487!6.43e-08!22;UBERON:0001008!7.40e-08!45;UBERON:0000025!8.51e-08!194;UBERON:0003103!1.00e-07!69;UBERON:0004111!1.07e-07!241;UBERON:0003886!1.19e-07!63;UBERON:0003104!1.31e-07!238;UBERON:0009142!1.31e-07!238;UBERON:0000468!1.40e-07!659;UBERON:0006554!2.46e-07!44;UBERON:0000490!3.33e-07!138;UBERON:0006914!3.36e-07!25;UBERON:0003887!5.21e-07!21;UBERON:0005256!6.90e-07!143;UBERON:0000489!7.83e-07!32;UBERON:0000058!8.13e-07!26;UBERON:0004876!8.48e-07!20;UBERON:0000926!8.85e-07!448;UBERON:0004120!8.85e-07!448;UBERON:0006603!8.85e-07!448;UBERON:0000477!9.07e-07!286;UBERON:0003064!9.51e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.09e-29;10!UBERON:0009773;2.09e-29;10!UBERON:0001231;2.09e-29;10!UBERON:0004810;2.09e-29;10!UBERON:0002113;2.26e-26;24!UBERON:0011143;2.26e-26;24!UBERON:0006555;2.22e-24;15!UBERON:0004819;2.22e-24;15!UBERON:0001285;2.22e-24;15!UBERON:0007684;2.22e-24;15!UBERON:0000489;2.19e-21;29!UBERON:0006554;1.38e-20;30!UBERON:0001008;1.38e-20;30!UBERON:0004638;3.14e-15;18!UBERON:0001986;3.14e-15;18!UBERON:0004852;3.14e-15;18!UBERON:0010523;1.95e-14;3!UBERON:0001915;1.95e-14;3!UBERON:0001982;1.95e-14;3!UBERON:0001225;6.55e-14;12!UBERON:0008987;6.55e-14;12!UBERON:0000487;3.09e-12;22!UBERON:0001851;5.28e-11;15!UBERON:0000353;5.28e-11;15!UBERON:0006914;1.27e-10;25!UBERON:0003914;1.40e-10;74!UBERON:0003567;2.69e-10;2!UBERON:0003838;2.69e-10;2!UBERON:0003586;2.69e-10;2!UBERON:0005169;2.69e-10;2!UBERON:0002321;2.69e-10;2!UBERON:0005215;2.69e-10;2!UBERON:0002303;2.69e-10;2!UBERON:0002319;2.69e-10;2!UBERON:0001638;1.68e-08;9!UBERON:0003920;1.68e-08;9!UBERON:0004582;1.68e-08;9!UBERON:0000490;6.72e-08;33!UBERON:0005172;9.99e-08;52!UBERON:0005173;9.99e-08;52!UBERON:0006853;1.09e-07;3!UBERON:0007685;1.09e-07;3!UBERON:0004134;1.09e-07;3!UBERON:0002417;3.89e-07;58!UBERON:0000916;3.89e-07;58!UBERON:0000025;8.54e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.65e-29,10;UBERON:0004211,1.92e-24,15;UBERON:0009773,1.92e-24,15;UBERON:0001231,1.92e-24,15;UBERON:0001285,1.92e-24,15;UBERON:0007684,1.92e-24,15;UBERON:0004208,1.92e-24,15;UBERON:0002113,3.89e-24,26;UBERON:0003918,3.89e-24,26;UBERON:0011143,3.89e-24,26;UBERON:0005095,3.89e-24,26;UBERON:0007687,3.89e-24,26;UBERON:0006555,8.14e-23,16;UBERON:0004819,8.14e-23,16;UBERON:0000489,7.85e-20,31;UBERON:0004638,2.27e-15,18;UBERON:0001986,2.27e-15,18;UBERON:0004852,2.27e-15,18;UBERON:0010523,1.17e-14,3;UBERON:0001915,1.17e-14,3;UBERON:0001982,1.17e-14,3;UBERON:0006554,2.26e-14,47;UBERON:0001008,5.14e-14,48;UBERON:0001225,6.80e-14,12;UBERON:0008987,6.80e-14,12;UBERON:0000487,2.38e-12,22;UBERON:0003914,2.20e-11,117;UBERON:0001851,5.43e-11,15;UBERON:0000353,5.43e-11,15;UBERON:0006914,1.02e-10,25;UBERON:0002417,1.21e-10,60;UBERON:0000916,1.21e-10,60;UBERON:0005172,2.56e-10,54;UBERON:0005173,2.56e-10,54;UBERON:0003567,3.66e-10,2;UBERON:0003838,3.66e-10,2;UBERON:0003586,3.66e-10,2;UBERON:0005169,3.66e-10,2;UBERON:0002321,3.66e-10,2;UBERON:0005215,3.66e-10,2;UBERON:0002303,3.66e-10,2;UBERON:0002319,3.66e-10,2;UBERON:0003103,4.35e-09,68;UBERON:0001638,1.79e-08,9;UBERON:0003920,1.79e-08,9;UBERON:0004582,1.79e-08,9;UBERON:0006853,1.11e-07,3;UBERON:0007685,1.11e-07,3;UBERON:0004134,1.11e-07,3;UBERON:0005177,2.28e-07,101;UBERON:0009569,2.71e-07,112 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0.738726348460727,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0.087834785693126,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0.825354125820202,0.835979866147242,0.516833518338658,0,1.33888245105868,1.61131726843659,2.28081631715554,1.70843440283719,1.83831540172934,0.81014194788176,3.39338967479503,0.44905874525234,2.0270066486998,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0,0.633152558322899,0,0.286836620748814,0,0,1.06748995729705,0.49333509683432,0,0.404132016209064,0.653847612453835,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.680593098960126,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0.171567810298526,0,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0.577465791044295,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0,1.0877350463246,0,0.0920809889358963,0,0,0.131124414959424,0.902399225814824,1.69433741629712,2.35304930753057,2.92278449306521,2.53323909342902,0,0.340187410553031,4.10240240594065,0,2.70946437543853,1.00337954770971,8.15604073744123,0.831076008928724,5.37299411333228,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0.275673144969061,0.322260734604821,0.145016693914229,0.681813019328807,8.19094727949984,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0.74129687641568,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,0,0.876901770507525,0,0.655894752046633,0.405820753925408,0.30982349809975,0,0.143411352204052,0.294747123039363,0.7133421029625,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.449341755736634,0.179021174675609,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,2.10998064528027,3.7543545876604,3.8165329287164,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.505492637027904,0,0,1.32930774541437,0.330991955875499,0.313932918407225,0,1.42304773014896,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0.640358984218058,0,0.144090417154106,0,0,0.288109595976299,0,0,4.89255141865011,6.79918501030166,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.688992370603241,0,0,0,0.160753148465019,0,0,0,0,0,0,4.57073102335349,1.04909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0,0.13223260174269,7.69890770479482,0,0.854299300541557,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.124980407962107,0.303298235083296,0.570930667089935,0,0,0,0,0,0,0,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0.591420599958536,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0.906823702049089,0.694567422971502,0,0,0.617602894321944,0.438568099157414,0,0.38582807654183,0,18.1931478197442,0.690860683462397,0.303859956177382,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,1.42769420259154,0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| ||
|short_description=p12@WWTR1 | |short_description=p12@WWTR1 | ||
}} | }} |
Latest revision as of 21:50, 15 September 2015
Short description: | p12@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -68bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.65e-29 | 10 |
nephron tubule epithelial cell | 1.65e-29 | 10 |
kidney cell | 1.26e-26 | 17 |
kidney epithelial cell | 1.26e-26 | 17 |
epithelial cell of nephron | 1.92e-24 | 15 |
blood vessel endothelial cell | 2.27e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-15 | 18 |
capillary endothelial cell | 1.17e-14 | 3 |
endothelial cell of vascular tree | 3.87e-14 | 24 |
kidney cortical cell | 6.80e-14 | 12 |
renal cortical epithelial cell | 6.80e-14 | 12 |
vein endothelial cell | 1.16e-12 | 6 |
meso-epithelial cell | 1.22e-12 | 45 |
endothelial cell | 4.07e-11 | 36 |
mesangial cell | 3.66e-10 | 2 |
kidney interstitial cell | 3.66e-10 | 2 |
juxtaglomerular complex cell | 3.66e-10 | 2 |
renal interstitial pericyte | 3.66e-10 | 2 |
extraglomerular mesangial cell | 3.66e-10 | 2 |
epithelial cell | 1.79e-08 | 253 |
brush border epithelial cell | 1.11e-07 | 3 |
kidney cortex tubule cell | 1.11e-07 | 3 |
epithelial cell of proximal tubule | 1.11e-07 | 3 |
lining cell | 1.14e-07 | 58 |
barrier cell | 1.14e-07 | 58 |
endothelial cell of umbilical vein | 2.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.17e-10 | 2 |