FFCP PHASE1:Hg19::chr19:12992244..12992272,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:12992244..12992272,-
|short_description=p2@DNASE2
|description=CAGE_peak_2_at_DNASE2_5end
|association_with_transcript=0bp_to_ENST00000538460_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1777 | |EntrezGene=1777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2960 | |HGNC=2960 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4K6 | |UniProt=B7Z4K6 | ||
|association_with_transcript=0bp_to_ENST00000538460_5end | |||
|cluster_id=chr19:12992244..12992272,- | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_2_at_DNASE2_5end | |||
|id=chr19:12992244..12992272,- | |||
|ontology_enrichment_celltype=CL:0002194!9.47e-25!63;CL:0000576!9.47e-25!63;CL:0000040!9.47e-25!63;CL:0000559!9.47e-25!63;CL:0002009!1.64e-22!65;CL:0000766!5.56e-21!76;CL:0000860!8.50e-21!45;CL:0002057!3.08e-20!42;CL:0000839!1.04e-19!70;CL:0000557!2.89e-18!71;CL:0000063!3.94e-13!578;CL:0000066!1.10e-09!254;CL:0000763!1.66e-09!112;CL:0000049!1.66e-09!112;CL:0002087!2.11e-09!119;CL:0000738!5.79e-08!140;CL:0000548!9.51e-08!679;CL:0000004!9.51e-08!679;CL:0000255!9.51e-08!679;CL:0000012!2.01e-07!682;CL:0002031!6.82e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.04e-16;39!CL:0000234;1.04e-16;39!CL:0000860;5.27e-16;33!CL:0002057;5.27e-16;33!CL:0000576;1.86e-15;48!CL:0000766;1.14e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.23e-24,59;CL:0000576,1.23e-24,59;CL:0000040,1.23e-24,59;CL:0000559,1.23e-24,59;CL:0000473,2.69e-24,48;CL:0000234,2.69e-24,48;CL:0002009,2.56e-22,61;CL:0000766,1.12e-20,72;CL:0000860,3.08e-20,42;CL:0002057,3.08e-20,42;CL:0000839,2.07e-19,66;CL:0000557,6.18e-18,67;CL:0000066,6.41e-10,253;CL:0000763,4.06e-09,108;CL:0000049,4.06e-09,108;CL:0002087,5.53e-09,115;CL:0000738,1.42e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;8.45e-15;42 | |||
|ontology_enrichment_disease=DOID:305!3.06e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.99e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.38e-16!80;UBERON:0001474!1.13e-15!86;UBERON:0002390!6.31e-15!102;UBERON:0003061!6.31e-15!102;UBERON:0002193!3.06e-14!112;UBERON:0002405!5.80e-12!115;UBERON:0004765!9.22e-12!101;UBERON:0001434!9.22e-12!101;UBERON:0000926!7.51e-08!448;UBERON:0004120!7.51e-08!448;UBERON:0006603!7.51e-08!448;UBERON:0003081!1.65e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-16,76;UBERON:0001474,2.94e-15,82;UBERON:0002390,1.77e-14,98;UBERON:0003061,1.77e-14,98;UBERON:0002405,6.06e-14,93;UBERON:0002193,8.77e-14,108;UBERON:0004765,3.84e-13,90;UBERON:0001434,5.41e-10,100;UBERON:0003081,3.53e-07,203 | |||
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| ||
|short_description=p2@DNASE2 | |||
}} | }} |
Latest revision as of 21:42, 15 September 2015
Short description: | p2@DNASE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNASE2_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000538460_5end |
EntrezGene: | DNASE2 |
HGNC: | 2960 |
UniProt: | B7Z4K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.23e-24 | 59 |
monocyte | 1.23e-24 | 59 |
monoblast | 1.23e-24 | 59 |
promonocyte | 1.23e-24 | 59 |
defensive cell | 2.69e-24 | 48 |
phagocyte | 2.69e-24 | 48 |
macrophage dendritic cell progenitor | 2.56e-22 | 61 |
myeloid leukocyte | 1.12e-20 | 72 |
classical monocyte | 3.08e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-20 | 42 |
myeloid lineage restricted progenitor cell | 2.07e-19 | 66 |
granulocyte monocyte progenitor cell | 6.18e-18 | 67 |
epithelial cell | 6.41e-10 | 253 |
myeloid cell | 4.06e-09 | 108 |
common myeloid progenitor | 4.06e-09 | 108 |
nongranular leukocyte | 5.53e-09 | 115 |
leukocyte | 1.42e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-16 | 76 |
bone element | 2.94e-15 | 82 |
hematopoietic system | 1.77e-14 | 98 |
blood island | 1.77e-14 | 98 |
immune system | 6.06e-14 | 93 |
hemolymphoid system | 8.77e-14 | 108 |
skeletal element | 3.84e-13 | 90 |
skeletal system | 5.41e-10 | 100 |
lateral plate mesoderm | 3.53e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.99e-08 | 106 |