FFCP PHASE1:Hg19::chr17:47841485..47841503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81558 | |EntrezGene=81558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24179 | |HGNC=24179 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFX7 | |UniProt=D6RFX7 | ||
|association_with_transcript=0bp_to_ENST00000506156_5end | |association_with_transcript=0bp_to_ENST00000506156_5end | ||
|cluster_id=chr17:47841485..47841503,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_FAM117A_5end | |description=CAGE_peak_1_at_FAM117A_5end | ||
|id=chr17:47841485..47841503,- | |id=chr17:47841485..47841503,- | ||
|ontology_enrichment_celltype=CL:0000037!6.91e-23!172;CL:0000566!6.91e-23!172;CL:0000988!1.36e-22!182;CL:0002032!2.39e-20!165;CL:0000837!2.39e-20!165;CL:0000542!2.19e-19!53;CL:0000051!2.19e-19!53;CL:0000838!5.23e-19!52;CL:0000738!2.54e-12!140;CL:0000084!1.06e-11!25;CL:0000827!1.06e-11!25;CL:0000791!1.56e-11!18;CL:0000789!1.56e-11!18;CL:0002420!1.56e-11!18;CL:0002419!1.56e-11!18;CL:0000790!1.56e-11!18;CL:0002087!7.90e-11!119;CL:0002031!1.71e-09!124;CL:0000625!1.04e-07!11;CL:0000236!3.76e-07!14;CL:0000945!4.14e-07!24;CL:0000826!4.14e-07!24 | |ontology_enrichment_celltype=CL:0000037!6.91e-23!172;CL:0000566!6.91e-23!172;CL:0000988!1.36e-22!182;CL:0002032!2.39e-20!165;CL:0000837!2.39e-20!165;CL:0000542!2.19e-19!53;CL:0000051!2.19e-19!53;CL:0000838!5.23e-19!52;CL:0000738!2.54e-12!140;CL:0000084!1.06e-11!25;CL:0000827!1.06e-11!25;CL:0000791!1.56e-11!18;CL:0000789!1.56e-11!18;CL:0002420!1.56e-11!18;CL:0002419!1.56e-11!18;CL:0000790!1.56e-11!18;CL:0002087!7.90e-11!119;CL:0002031!1.71e-09!124;CL:0000625!1.04e-07!11;CL:0000236!3.76e-07!14;CL:0000945!4.14e-07!24;CL:0000826!4.14e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000542;5.12e-12;53!CL:0000084;9.33e-12;25!CL:0000791;1.50e-11;18!CL:0000789;1.50e-11;18!CL:0002419;1.50e-11;18!CL:0000625;1.01e-07;11!CL:0000945;3.76e-07;24!CL:0000236;8.93e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.72e-25,168;CL:0000988,2.88e-25,177;CL:0002032,7.89e-23,161;CL:0000837,7.89e-23,161;CL:0000542,2.00e-19,53;CL:0000051,2.00e-19,53;CL:0000838,4.79e-19,52;CL:0000738,2.54e-14,136;CL:0002087,7.52e-13,115;CL:0000084,9.63e-12,25;CL:0000827,9.63e-12,25;CL:0000791,1.56e-11,18;CL:0000789,1.56e-11,18;CL:0002420,1.56e-11,18;CL:0002419,1.56e-11,18;CL:0000790,1.56e-11,18;CL:0002031,2.60e-11,120;CL:0000625,1.04e-07,11;CL:0000763,2.30e-07,108;CL:0000049,2.30e-07,108;CL:0000236,3.76e-07,14;CL:0000945,4.13e-07,24;CL:0000826,4.13e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;5.12e-12;53!CL:0000790;1.50e-11;18 | |||
|ontology_enrichment_disease=DOID:1240!2.10e-14!39;DOID:2531!5.28e-13!51;DOID:0060083!5.28e-13!51;DOID:8692!1.82e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.25e-11;31!DOID:1240;4.77e-11;39!DOID:2531;7.28e-09;51!DOID:0060083;7.28e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.09e-14,39;DOID:2531,4.91e-13,51;DOID:0060083,4.91e-13,51;DOID:8692,1.81e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.54e-09!15;UBERON:0000179!1.54e-09!15;UBERON:0000463!1.54e-09!15;UBERON:0007023!1.63e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-09;15!UBERON:0000179;1.48e-09;15!UBERON:0000463;1.48e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.54e-09,15;UBERON:0000179,1.54e-09,15;UBERON:0000463,1.54e-09,15;UBERON:0007023,1.23e-07,114 | |||
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| ||
|short_description=p1@FAM117A | |short_description=p1@FAM117A | ||
}} | }} |
Latest revision as of 21:40, 15 September 2015
Short description: | p1@FAM117A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM117A_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000506156_5end |
EntrezGene: | FAM117A |
HGNC: | 24179 |
UniProt: | D6RFX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.72e-25 | 168 |
hematopoietic cell | 2.88e-25 | 177 |
hematopoietic oligopotent progenitor cell | 7.89e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.89e-23 | 161 |
lymphocyte | 2.00e-19 | 53 |
common lymphoid progenitor | 2.00e-19 | 53 |
lymphoid lineage restricted progenitor cell | 4.79e-19 | 52 |
leukocyte | 2.54e-14 | 136 |
nongranular leukocyte | 7.52e-13 | 115 |
T cell | 9.63e-12 | 25 |
pro-T cell | 9.63e-12 | 25 |
mature alpha-beta T cell | 1.56e-11 | 18 |
alpha-beta T cell | 1.56e-11 | 18 |
immature T cell | 1.56e-11 | 18 |
mature T cell | 1.56e-11 | 18 |
immature alpha-beta T cell | 1.56e-11 | 18 |
hematopoietic lineage restricted progenitor cell | 2.60e-11 | 120 |
CD8-positive, alpha-beta T cell | 1.04e-07 | 11 |
myeloid cell | 2.30e-07 | 108 |
common myeloid progenitor | 2.30e-07 | 108 |
B cell | 3.76e-07 | 14 |
lymphocyte of B lineage | 4.13e-07 | 24 |
pro-B cell | 4.13e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 1.54e-09 | 15 |
haemolymphatic fluid | 1.54e-09 | 15 |
organism substance | 1.54e-09 | 15 |
adult organism | 1.23e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.09e-14 | 39 |
hematologic cancer | 4.91e-13 | 51 |
immune system cancer | 4.91e-13 | 51 |
myeloid leukemia | 1.81e-11 | 31 |