FFCP PHASE1:Hg19::chr4:144257726..144257735,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:144257726..144257735,+ to FFCP PHASE1:Hg19::chr4:144257726..144257735,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2549 | |EntrezGene=2549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4066 | |HGNC=4066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-179bp_to_ENST00000262995_5end | |||
|cluster_id=chr4:144257726..144257735,+ | |||
|description=CAGE_peak_10_at_GAB1_5end | |||
|id=chr4:144257726..144257735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.70e-09;4!UBERON:0007284;1.70e-09;4!UBERON:0007297;1.45e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.50e-28!115;UBERON:0001049!1.49e-15!57;UBERON:0005068!1.49e-15!57;UBERON:0006241!1.49e-15!57;UBERON:0007135!1.49e-15!57;UBERON:0002616!5.58e-15!59;UBERON:0001017!1.55e-13!82;UBERON:0005743!6.56e-13!86;UBERON:0003075!1.67e-12!86;UBERON:0007284!1.67e-12!86;UBERON:0000955!2.60e-12!69;UBERON:0006238!2.60e-12!69;UBERON:0000073!5.44e-12!94;UBERON:0001016!5.44e-12!94;UBERON:0002346!1.79e-11!90;UBERON:0003080!2.45e-10!42;UBERON:0002780!1.00e-09!41;UBERON:0001890!1.00e-09!41;UBERON:0006240!1.00e-09!41;UBERON:0001893!1.21e-09!34;UBERON:0002020!1.40e-09!34;UBERON:0003528!1.40e-09!34;UBERON:0002791!4.11e-09!33;UBERON:0001869!2.10e-08!32;UBERON:0000062!3.80e-08!511;UBERON:0004121!1.01e-07!169;UBERON:0000468!1.11e-07!659;UBERON:0002308!1.68e-07!9;UBERON:0000125!1.68e-07!9;UBERON:0000924!2.91e-07!173;UBERON:0006601!2.91e-07!173;UBERON:0002298!5.11e-07!8;UBERON:0004111!5.90e-07!241;UBERON:0003076!9.36e-07!15;UBERON:0003057!9.36e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.62e-12;3!UBERON:0000946;1.62e-12;3!UBERON:0000125;2.34e-10;9!UBERON:0002308;2.34e-10;9!UBERON:0002133;4.39e-09;2!UBERON:0002360;5.36e-09;2!UBERON:0005162;5.36e-09;2!UBERON:0000122;5.36e-09;2!UBERON:0000094;5.36e-09;2!UBERON:0010743;5.36e-09;2!UBERON:0009663;7.44e-09;7!UBERON:0007023;2.31e-08;114!UBERON:0004732;4.47e-07;13!UBERON:0002420;6.78e-07;9!UBERON:0007245;6.78e-07;9!UBERON:0010009;6.78e-07;9!UBERON:0010011;6.78e-07;9!UBERON:0000454;6.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.82e-21,114;UBERON:0003978,7.96e-13,3;UBERON:0009751,7.96e-13,3;UBERON:0000946,7.96e-13,3;UBERON:0002523,7.96e-13,3;UBERON:0005983,7.96e-13,3;UBERON:0002165,7.96e-13,3;UBERON:0002062,7.96e-13,3;UBERON:0007280,7.96e-13,3;UBERON:0000125,7.29e-10,9;UBERON:0002308,7.29e-10,9;UBERON:0003075,2.55e-09,82;UBERON:0007284,2.55e-09,82;UBERON:0002133,2.92e-09,2;UBERON:0005162,4.02e-09,2;UBERON:0000122,4.02e-09,2;UBERON:0002360,8.85e-09,2;UBERON:0000094,8.85e-09,2;UBERON:0010743,8.85e-09,2;UBERON:0002346,1.02e-08,86;UBERON:0009663,1.59e-08,7;UBERON:0004732,3.88e-07,13;UBERON:0001049,5.66e-07,56;UBERON:0005068,5.66e-07,56;UBERON:0006241,5.66e-07,56;UBERON:0007135,5.66e-07,56 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0.313454721478088,1.14494394852423,0.273748850145768,0.376627918784408,0,0,0.157421562627358,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.419317291016752,0,0.150176892841506,0.32145117339416,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.785874452986276,0.364295288292542,0,0,0,0,0.953962497221368,1.14398982156026,0,0.993812036833525,0,1.04142150482278,0,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.450445921933289,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0.354668382198357,0,0,0,0.933633106199299,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0,0,0.276149695926898,0.484938170456436,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.317489471460845,0,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0.414415513436035,0.36807447515742,0,0,0.207970861530807,0,0.315404830067869,0,0.601892199455438,0,0,0.664225598535437,0,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0.368323955743585,0.114814448164607,0.182091168006717,0.524497659837696,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,1.09629938322967,0,0,0,0,1.03041011647722,0.366277859273374,0.247528499761764,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0.571890581771475,0.511795582622668,1.28381696410176,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0.822724546172388,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.879049075631364,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0.562677665642051,0,0,0,1.79323189425963,0.828851746593443,0.251932747854276,0,0,0,0,0.179021174675609,0,0.591860433821602,0,0,0,0.556608588971108,0,0,0.437299999980979,1.44999915086959,0,0,0.472775363535873,0,0,0,0.885741385813839,1.08536794762867,1.52581736317083,0.221158519862449,0.295547618953547,1.09692698576986,0,0.139423744278603,1.15425387755696,0.227884111694002,0,0,0.869178975376065,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0.158936578980379,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0.707660516026713,0,0,0,0,2.22423738836234,1.60515529459758,0.937057782901357,0,0,0,0.394584402849391,0,0.61214552326098,2.27471686662557,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.261177619741208,1.04836000945218,0,0.19351266257817,0.0730893170861856,0,0.775912131907355,0,1.12990370390266,0,0,1.07628353124994,0.195551382734803,0.160317640503067,0.85381197895741,0,0,0,0,0.14405479798815,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0.288950589901519,0.600420288709789,1.09524303113594,2.55493176133945,0,0,3.0721064139948,1.3749625440701,1.43574604915363,0.199679000498991,0,0.223171457441873,0.604651252380536,0,1.16495949527454,0.157566364614447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| ||
|short_description=p10@GAB1 | |||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p10@GAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GAB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -179bp_to_ENST00000262995_5end |
EntrezGene: | GAB1 |
HGNC: | 4066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.82e-21 | 114 |
valve | 7.96e-13 | 3 |
cardiac mesenchyme | 7.96e-13 | 3 |
cardial valve | 7.96e-13 | 3 |
tunica intima | 7.96e-13 | 3 |
heart layer | 7.96e-13 | 3 |
endocardium | 7.96e-13 | 3 |
endocardial cushion | 7.96e-13 | 3 |
presumptive endocardium | 7.96e-13 | 3 |
neural nucleus | 7.29e-10 | 9 |
nucleus of brain | 7.29e-10 | 9 |
neural plate | 2.55e-09 | 82 |
presumptive neural plate | 2.55e-09 | 82 |
atrioventricular valve | 2.92e-09 | 2 |
multi cell component structure | 4.02e-09 | 2 |
neuron projection bundle | 4.02e-09 | 2 |
meninx | 8.85e-09 | 2 |
membrane organ | 8.85e-09 | 2 |
meningeal cluster | 8.85e-09 | 2 |
neurectoderm | 1.02e-08 | 86 |
telencephalic nucleus | 1.59e-08 | 7 |
segmental subdivision of nervous system | 3.88e-07 | 13 |
neural tube | 5.66e-07 | 56 |
neural rod | 5.66e-07 | 56 |
future spinal cord | 5.66e-07 | 56 |
neural keel | 5.66e-07 | 56 |