FFCP PHASE1:Hg19::chr12:91576561..91576613,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:91576561..91576613,- to FFCP PHASE1:Hg19::chr12:91576561..91576613,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1634 | |EntrezGene=1634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2705 | |HGNC=2705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547568,ENST00000552962_5end | |||
|cluster_id=chr12:91576561..91576613,- | |||
|coexpression_cluster_id=C3342 | |||
|description=CAGE_peak_1_at_DCN_5end | |||
|id=chr12:91576561..91576613,- | |||
|ontology_enrichment_celltype=CL:0000055!2.87e-22!180;CL:0000057!1.64e-16!75;CL:0000680!1.31e-10!57;CL:0000056!1.31e-10!57;CL:0000355!1.31e-10!57;CL:0000183!1.23e-09!59;CL:0000187!1.32e-09!54;CL:0002620!3.60e-08!23;CL:0000393!7.92e-08!60;CL:0000211!7.92e-08!60;CL:0000192!1.61e-07!42;CL:0000514!1.61e-07!42;CL:0000499!9.94e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.90e-08;23!CL:0000134;1.26e-07;55!CL:0000723;3.06e-07;61!CL:0000057;5.73e-07;73!CL:0000048;8.23e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-17,76;CL:0000680,1.92e-11,58;CL:0000056,1.92e-11,58;CL:0000355,1.92e-11,58;CL:0000187,2.18e-10,55;CL:0000393,1.29e-08,61;CL:0000211,1.29e-08,61;CL:0002620,1.89e-08,23;CL:0000192,3.33e-08,43;CL:0000514,3.33e-08,43;CL:0000136,7.17e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.96e-16!347;UBERON:0000914!1.12e-15!83;UBERON:0002329!1.12e-15!83;UBERON:0003077!1.12e-15!83;UBERON:0003059!1.12e-15!83;UBERON:0007282!1.12e-15!83;UBERON:0009618!1.12e-15!83;UBERON:0007285!1.12e-15!83;UBERON:0000475!1.17e-15!365;UBERON:0000468!1.29e-14!659;UBERON:0004290!1.96e-13!70;UBERON:0007023!6.60e-13!115;UBERON:0002385!1.05e-12!63;UBERON:0001015!1.05e-12!63;UBERON:0000383!1.05e-12!63;UBERON:0005256!2.07e-12!143;UBERON:0001134!4.92e-12!61;UBERON:0002036!4.92e-12!61;UBERON:0003082!4.92e-12!61;UBERON:0000479!3.18e-11!787;UBERON:0007100!3.40e-11!27;UBERON:0000486!6.25e-11!82;UBERON:0000948!3.33e-10!24;UBERON:0005498!3.33e-10!24;UBERON:0004140!3.33e-10!24;UBERON:0009881!3.33e-10!24;UBERON:0004141!3.33e-10!24;UBERON:0003084!3.33e-10!24;UBERON:0007005!3.33e-10!24;UBERON:0004139!3.33e-10!24;UBERON:0004291!3.33e-10!24;UBERON:0003104!6.93e-10!238;UBERON:0009142!6.93e-10!238;UBERON:0000477!8.30e-10!286;UBERON:0000467!1.75e-09!625;UBERON:0000480!2.72e-09!626;UBERON:0003102!3.39e-09!95;UBERON:0000922!2.30e-08!612;UBERON:0000062!2.84e-08!511;UBERON:0002100!3.68e-08!216;UBERON:0003103!4.19e-08!69;UBERON:0000119!5.04e-08!312;UBERON:0002050!5.75e-08!605;UBERON:0005423!5.75e-08!605;UBERON:0000483!1.09e-07!309;UBERON:0000923!1.17e-07!604;UBERON:0005291!1.17e-07!604;UBERON:0006598!1.17e-07!604;UBERON:0002532!1.17e-07!604;UBERON:0002199!3.98e-07!45;UBERON:0002416!3.98e-07!45;UBERON:0001013!6.30e-07!14;UBERON:0004872!6.81e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.99e-11;25!UBERON:0000948;8.49e-10;22!UBERON:0002385;1.63e-08;31!UBERON:0001015;1.63e-08;31!UBERON:0000383;1.63e-08;31!UBERON:0001013;3.74e-07;14!UBERON:0002384;3.84e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.74e-15,73;UBERON:0003077,1.80e-14,72;UBERON:0007285,1.80e-14,72;UBERON:0002329,2.10e-14,71;UBERON:0003059,2.10e-14,71;UBERON:0007282,2.10e-14,71;UBERON:0004290,2.10e-14,71;UBERON:0009618,2.10e-14,71;UBERON:0000479,7.61e-14,773;UBERON:0002385,1.21e-13,64;UBERON:0001015,1.21e-13,64;UBERON:0000383,1.21e-13,64;UBERON:0003104,2.56e-13,160;UBERON:0009142,2.56e-13,160;UBERON:0007023,2.89e-13,114;UBERON:0001134,6.08e-13,62;UBERON:0002036,6.08e-13,62;UBERON:0003082,6.08e-13,62;UBERON:0007503,1.48e-12,78;UBERON:0007100,1.34e-11,27;UBERON:0000486,3.06e-11,83;UBERON:0005256,6.98e-11,122;UBERON:0000948,1.44e-10,24;UBERON:0005498,1.44e-10,24;UBERON:0004140,1.44e-10,24;UBERON:0009881,1.44e-10,24;UBERON:0004141,1.44e-10,24;UBERON:0003084,1.44e-10,24;UBERON:0007005,1.44e-10,24;UBERON:0004139,1.44e-10,24;UBERON:0004291,1.44e-10,24;UBERON:0003102,4.58e-09,99;UBERON:0010314,1.12e-08,132;UBERON:0000119,1.23e-07,309;UBERON:0002199,1.48e-07,46;UBERON:0002416,1.48e-07,46;UBERON:0003103,1.67e-07,68;UBERON:0000483,2.67e-07,306;UBERON:0002050,2.76e-07,564;UBERON:0000923,2.84e-07,560;UBERON:0010316,2.84e-07,560;UBERON:0005291,2.84e-07,560;UBERON:0006598,2.84e-07,560;UBERON:0010317,2.84e-07,560;UBERON:0002532,2.84e-07,560;UBERON:0001013,3.73e-07,14;UBERON:0005423,7.22e-07,581 | |||
|phase1_expression=169.6876062387,180.70084216399,111.072070427625,248.181779915763,207.836908908689,191.042136777981,146.91392933762,380.927083676379,367.749364505373,0.245733936501509,0,2.83973783769224,3.4289707169699,263.746098157859,244.239865911474,48.4074105445278,33.1481990413187,40.1670549713055,52.6967422693748,3.20114750999649,1.83600622119828,2.5076377718247,1.71741592278634,0.684372125364421,5.77496142136093,0,0.0821005894499457,0,0,0,34.2143632528528,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1671661790691,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,3.81621501814146,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,546.127380543274,183.772035558796,86.4350918062265,932.151573999796,422.627858666055,1024.64427512887,412.753406519521,524.592390186241,0.283604451492204,7.9822583086523,7.64162635530197,143.74953535874,0,0,0,0,0.531831842075461,0,0,0,0,18.9251610923347,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,1.22031028774085,0.735326160691737,0,0,0.22452937262617,0,0,0,2.5648244150257,0,0,0,427.395878457974,26.8456684728909,222.97706048946,1009.95174165657,145.414036701326,398.64177370118,4.2699598291882,32.0667812942308,330.506119594552,306.197357614401,424.510562385652,969.89839634872,1647.8631440128,11.9503930235236,48.3848119086997,48.4901048312782,326.395918325134,71.9873476686279,44.353186756868,44.9442581447195,113.509719217721,9.2125737983826,184.539845179917,703.297691510976,364.224186827314,13.6524204290704,14.3723628363248,45.787422995506,35.2834226038939,100.297209805274,193.150153187569,167.342336506265,224.756136124269,295.604269315015,134.721616402335,751.935566030176,371.516622732712,179.754566554557,449.824290125786,145.051624045689,190.955894596211,45.2320570406593,59.2416991380088,151.965132094957,982.264468411976,986.202592651571,375.600148882578,151.027395243233,65.9590704087797,0,0.272746120590835,0,0.121973706129595,0,3.25343040034651,2.90250954043037,0.504641701751257,1.09493207722749,114.208158600766,78.475394459532,6.90674606762403,768.528920892925,902.349352086982,23.7796668080086,20.9045015696846,10.3634742849897,23.3823222192675,23.3131005178875,12.5753428128881,22.3819971545873,21.3881396986627,13.0814033361773,0,1.40241773803446,78.199062152966,99.9659237421685,13.9430538304014,27.5191620669735,435.412161224195,6.18048339180511,0,4.63233087806019,0,0,0,0,1.62904152655162,15.5990217791937,0,0.115930404975077,209.33970182247,0,0,0,0,0,0,0,0,4.68669169933885,0.839910640994298,0.283550194484773,0,0,2.30029607499127,0,0,6.21984346622316,3.45887888200707,3.53478813593864,10.2866588753314,0,0,78.6933251704444,13.5732290368387,0,0,29.3783440984845,144.738742852649,34.5423326216675,240.186847877951,85.8375470044518,108.198752327168,31.9125739901845,39.5228260263191,15.1752350814664,15.6034045225606,6.92697665441858,372.314695485816,504.638093014042,30.4598924608884,94.7892296294769,281.115031455354,83.9468985309435,17.483483869456,28.7606041338097,3.79897366491817,0,0,0,76.919578612798,342.288568785659,8.5582143024431,450.704207656174,130.682941142044,157.036464761388,0,0,0,0,1.77866236955724,2.60279707715243,5.41302168944387,1.50764638800914,6.37938751653163,0,0,0,339.610049078579,280.095491793419,77.8530618018241,45.7535895367776,177.715272841973,42.4219496441284,72.9791015404603,318.701919611654,516.215034207086,261.786870370037,56.4591758755121,32.264604494798,435.460675714031,54.2369206171791,116.668764095691,0,0,0,5.15316871458641,4.99306318531491,46.2657148794411,145.887390997441,94.8394994920226,120.683840606222,140.824925032015,285.532644979221,140.425473158369,94.9875625247942,83.735863734842,218.933607311086,130.582178061957,216.009842540386,150.957281619487,0.241718899183244,0,0,455.928173661653,291.710051146761,511.385218341754,0.902399225814824,2.77255213575893,2.35304930753057,2.92278449306521,25.1212876765044,0,0.170093705276516,18.3528528686818,1.54227252690289,13.5473218771926,6.52196706011309,1.27438136522519,2.49322802678617,0.895499018888713,0,0,0,8.20036614249264,12.3643789972435,255.541708886351,0.54941678891006,0.82509499920588,43.6441808877091,13.0012049207304,134.974501069094,41.8584210204888,18.177736819528,41.445992176055,68.0912668073581,281.011360575404,96.7261348407904,18.4941781492939,108.61908348902,0,0.192190067365106,0,0.50578890427775,50.6681648734042,957.659159058807,54.3689070725268,300.02470709151,25.550689455217,46.9763815720539,1.8532421910392,7.29936922384155,168.21558295057,104.40521015718,152.313524945136,25.0779835485107,412.105245476665,98.3248036091145,8.63443504219153,340.318689747631,369.801379054466,148.090189748528,31.5404671254373,15.8510321173008,109.527198622135,38.035431648988,61.659512876715,3.16950440270266,185.230379780637,446.841164973732,167.252012597959,44.6605928272361,12.6053405295832,32.4453655087784,66.5591864406691,362.709797881788,3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| ||
|short_description=p1@DCN | |||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p1@DCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCN_5end |
Coexpression cluster: | C3342_tenocyte_skin_umbilical_Fibroblast_trachea_heart_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000547568, ENST00000552962_5end |
EntrezGene: | DCN |
HGNC: | 2705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-17 | 76 |
muscle precursor cell | 1.92e-11 | 58 |
myoblast | 1.92e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-11 | 58 |
muscle cell | 2.18e-10 | 55 |
electrically responsive cell | 1.29e-08 | 61 |
electrically active cell | 1.29e-08 | 61 |
skin fibroblast | 1.89e-08 | 23 |
smooth muscle cell | 3.33e-08 | 43 |
smooth muscle myoblast | 3.33e-08 | 43 |
fat cell | 7.17e-07 | 15 |