FFCP PHASE1:Hg19::chr12:91572143..91572274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1634 | |EntrezGene=1634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2705 | |HGNC=2705 | ||
|TSSclassifier=strong | |||
|UniProt=P07585,Q6FH10 | |UniProt=P07585,Q6FH10 | ||
|association_with_transcript=54bp_to_AF138300,AF138301,AF138302,AF138303,AF138304,BT019800,CR407676,CR541946_5end | |association_with_transcript=54bp_to_AF138300,AF138301,AF138302,AF138303,AF138304,BT019800,CR407676,CR541946_5end | ||
|cluster_id=chr12:91572143..91572274,- | |||
|coexpression_cluster_id=C540 | |coexpression_cluster_id=C540 | ||
|description=CAGE_peak_6_at_DCN_5end | |description=CAGE_peak_6_at_DCN_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.65e-22!180;CL:0000057!7.82e-19!75;CL:0000680!5.90e-10!57;CL:0000056!5.90e-10!57;CL:0000355!5.90e-10!57;CL:0000187!4.75e-09!54;CL:0000136!7.55e-09!15;CL:0002620!1.23e-08!23;CL:0000183!2.39e-08!59;CL:0002334!2.15e-07!12;CL:0000327!2.40e-07!14;CL:0000499!4.24e-07!27;CL:0000393!4.92e-07!60;CL:0000211!4.92e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.65e-22!180;CL:0000057!7.82e-19!75;CL:0000680!5.90e-10!57;CL:0000056!5.90e-10!57;CL:0000355!5.90e-10!57;CL:0000187!4.75e-09!54;CL:0000136!7.55e-09!15;CL:0002620!1.23e-08!23;CL:0000183!2.39e-08!59;CL:0002334!2.15e-07!12;CL:0000327!2.40e-07!14;CL:0000499!4.24e-07!27;CL:0000393!4.92e-07!60;CL:0000211!4.92e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.07e-10;23!CL:0000499;6.05e-09;28!CL:0000327;1.59e-08;15!CL:0000136;2.11e-08;13!CL:0002334;2.34e-08;12!CL:0000134;4.88e-08;55!CL:0000723;1.22e-07;61!CL:0000057;1.43e-07;73!CL:0002320;4.26e-07;188!CL:0000153;4.93e-07;9!CL:0000447;4.93e-07;9!CL:0000048;8.42e-07;58 | |ontology_enrichment_celltype_v019=CL:0002620;9.07e-10;23!CL:0000499;6.05e-09;28!CL:0000327;1.59e-08;15!CL:0000136;2.11e-08;13!CL:0002334;2.34e-08;12!CL:0000134;4.88e-08;55!CL:0000723;1.22e-07;61!CL:0000057;1.43e-07;73!CL:0002320;4.26e-07;188!CL:0000153;4.93e-07;9!CL:0000447;4.93e-07;9!CL:0000048;8.42e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-19,76;CL:0000136,4.98e-10,15;CL:0002620,8.75e-10,23;CL:0000499,5.37e-09,28;CL:0000327,1.38e-08,15;CL:0002334,2.42e-08,12;CL:0000048,3.73e-08,427;CL:0000680,6.10e-08,58;CL:0000056,6.10e-08,58;CL:0000355,6.10e-08,58;CL:0000723,1.81e-07,433;CL:0000153,4.95e-07,9;CL:0000447,4.95e-07,9;CL:0000187,5.07e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.50e-14!83;UBERON:0002329!8.50e-14!83;UBERON:0003077!8.50e-14!83;UBERON:0003059!8.50e-14!83;UBERON:0007282!8.50e-14!83;UBERON:0009618!8.50e-14!83;UBERON:0007285!8.50e-14!83;UBERON:0004290!1.64e-12!70;UBERON:0002385!8.19e-12!63;UBERON:0001015!8.19e-12!63;UBERON:0000383!8.19e-12!63;UBERON:0001134!3.94e-11!61;UBERON:0002036!3.94e-11!61;UBERON:0003082!3.94e-11!61;UBERON:0000486!3.71e-10!82;UBERON:0000481!4.83e-10!347;UBERON:0005256!5.18e-10!143;UBERON:0000475!1.16e-09!365;UBERON:0003104!1.31e-09!238;UBERON:0009142!1.31e-09!238;UBERON:0000479!1.94e-09!787;UBERON:0007100!2.27e-09!27;UBERON:0007023!3.12e-09!115;UBERON:0002100!4.14e-09!216;UBERON:0003102!4.46e-09!95;UBERON:0000468!1.16e-08!659;UBERON:0000948!1.72e-08!24;UBERON:0005498!1.72e-08!24;UBERON:0004140!1.72e-08!24;UBERON:0009881!1.72e-08!24;UBERON:0004141!1.72e-08!24;UBERON:0003084!1.72e-08!24;UBERON:0007005!1.72e-08!24;UBERON:0004139!1.72e-08!24;UBERON:0004291!1.72e-08!24;UBERON:0001013!3.45e-07!14;UBERON:0002199!3.92e-07!45;UBERON:0002416!3.92e-07!45 | |ontology_enrichment_uberon=UBERON:0000914!8.50e-14!83;UBERON:0002329!8.50e-14!83;UBERON:0003077!8.50e-14!83;UBERON:0003059!8.50e-14!83;UBERON:0007282!8.50e-14!83;UBERON:0009618!8.50e-14!83;UBERON:0007285!8.50e-14!83;UBERON:0004290!1.64e-12!70;UBERON:0002385!8.19e-12!63;UBERON:0001015!8.19e-12!63;UBERON:0000383!8.19e-12!63;UBERON:0001134!3.94e-11!61;UBERON:0002036!3.94e-11!61;UBERON:0003082!3.94e-11!61;UBERON:0000486!3.71e-10!82;UBERON:0000481!4.83e-10!347;UBERON:0005256!5.18e-10!143;UBERON:0000475!1.16e-09!365;UBERON:0003104!1.31e-09!238;UBERON:0009142!1.31e-09!238;UBERON:0000479!1.94e-09!787;UBERON:0007100!2.27e-09!27;UBERON:0007023!3.12e-09!115;UBERON:0002100!4.14e-09!216;UBERON:0003102!4.46e-09!95;UBERON:0000468!1.16e-08!659;UBERON:0000948!1.72e-08!24;UBERON:0005498!1.72e-08!24;UBERON:0004140!1.72e-08!24;UBERON:0009881!1.72e-08!24;UBERON:0004141!1.72e-08!24;UBERON:0003084!1.72e-08!24;UBERON:0007005!1.72e-08!24;UBERON:0004139!1.72e-08!24;UBERON:0004291!1.72e-08!24;UBERON:0001013!3.45e-07!14;UBERON:0002199!3.92e-07!45;UBERON:0002416!3.92e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.70e-09;25!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0000948;1.90e-08;22!UBERON:0001013;3.43e-08;14!UBERON:0002384;8.80e-08;198 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.70e-09;25!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0000948;1.90e-08;22!UBERON:0001013;3.43e-08;14!UBERON:0002384;8.80e-08;198 | ||
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| ||
|short_description=p6@DCN | |short_description=p6@DCN | ||
}} | }} |
Latest revision as of 21:24, 15 September 2015
Short description: | p6@DCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DCN_5end |
Coexpression cluster: | C540_tenocyte_Chondrocyte_Adipocyte_normal_Synoviocyte_Fibroblast_heart |
Association with transcript: | 54bp_to_AF138300, AF138301, AF138302, AF138303, AF138304, BT019800, CR407676, CR541946_5end |
EntrezGene: | DCN |
HGNC: | 2705 |
UniProt: | P07585Q6FH10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-19 | 76 |
fat cell | 4.98e-10 | 15 |
skin fibroblast | 8.75e-10 | 23 |
stromal cell | 5.37e-09 | 28 |
extracellular matrix secreting cell | 1.38e-08 | 15 |
preadipocyte | 2.42e-08 | 12 |
multi fate stem cell | 3.73e-08 | 427 |
muscle precursor cell | 6.10e-08 | 58 |
myoblast | 6.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.10e-08 | 58 |
somatic stem cell | 1.81e-07 | 433 |
GAG secreting cell | 4.95e-07 | 9 |
carbohydrate secreting cell | 4.95e-07 | 9 |
muscle cell | 5.07e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.79e-11 | 73 |
somite | 8.54e-11 | 71 |
presomitic mesoderm | 8.54e-11 | 71 |
presumptive segmental plate | 8.54e-11 | 71 |
dermomyotome | 8.54e-11 | 71 |
trunk paraxial mesoderm | 8.54e-11 | 71 |
surface structure | 1.57e-10 | 99 |
paraxial mesoderm | 1.97e-10 | 72 |
presumptive paraxial mesoderm | 1.97e-10 | 72 |
mesenchyme | 3.02e-10 | 160 |
entire embryonic mesenchyme | 3.02e-10 | 160 |
primary circulatory organ | 3.21e-10 | 27 |
muscle tissue | 7.28e-10 | 64 |
musculature | 7.28e-10 | 64 |
musculature of body | 7.28e-10 | 64 |
multilaminar epithelium | 2.54e-09 | 83 |
heart | 3.37e-09 | 24 |
primitive heart tube | 3.37e-09 | 24 |
primary heart field | 3.37e-09 | 24 |
anterior lateral plate mesoderm | 3.37e-09 | 24 |
heart tube | 3.37e-09 | 24 |
heart primordium | 3.37e-09 | 24 |
cardiac mesoderm | 3.37e-09 | 24 |
cardiogenic plate | 3.37e-09 | 24 |
heart rudiment | 3.37e-09 | 24 |
skeletal muscle tissue | 3.70e-09 | 62 |
striated muscle tissue | 3.70e-09 | 62 |
myotome | 3.70e-09 | 62 |
trunk mesenchyme | 4.22e-09 | 122 |
integument | 1.40e-08 | 46 |
integumental system | 1.40e-08 | 46 |
epithelial vesicle | 1.68e-08 | 78 |
tissue | 1.92e-08 | 773 |
adipose tissue | 2.94e-08 | 14 |