FFCP PHASE1:Hg19::chr8:120428600..120428642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4856 | |EntrezGene=4856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7885 | |HGNC=7885 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000520082_5end | |association_with_transcript=-47bp_to_ENST00000520082_5end | ||
|cluster_id=chr8:120428600..120428642,+ | |||
|coexpression_cluster_id=C4722 | |coexpression_cluster_id=C4722 | ||
|description=CAGE_peak_2_at_NOV_5end | |description=CAGE_peak_2_at_NOV_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.27e-07;14 | |ontology_enrichment_celltype_v019=CL:0000147;1.27e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.30e-07,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-19!115;UBERON:0005743!2.78e-14!86;UBERON:0001017!7.39e-13!82;UBERON:0000073!4.54e-12!94;UBERON:0001016!4.54e-12!94;UBERON:0001869!8.72e-12!32;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002619!1.87e-11!22;UBERON:0001893!2.34e-11!34;UBERON:0003080!4.09e-11!42;UBERON:0000956!6.99e-11!25;UBERON:0000203!6.99e-11!25;UBERON:0002791!8.94e-11!33;UBERON:0002780!1.01e-10!41;UBERON:0001890!1.01e-10!41;UBERON:0006240!1.01e-10!41;UBERON:0001950!1.04e-10!20;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0003075!1.89e-10!86;UBERON:0007284!1.89e-10!86;UBERON:0002020!1.94e-10!34;UBERON:0003528!1.94e-10!34;UBERON:0003056!3.59e-10!61;UBERON:0002346!7.23e-10!90;UBERON:0002616!1.78e-09!59;UBERON:0000062!3.74e-09!511;UBERON:0000033!7.19e-09!123;UBERON:0000467!2.04e-08!625;UBERON:0000153!2.45e-08!129;UBERON:0007811!2.45e-08!129;UBERON:0000480!3.08e-08!626;UBERON:0004121!1.84e-07!169;UBERON:0000468!2.34e-07!659;UBERON:0000924!3.28e-07!173;UBERON:0006601!3.28e-07!173;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!8.40e-07!605;UBERON:0005423!8.40e-07!605;UBERON:0000922!9.69e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!8.66e-19!115;UBERON:0005743!2.78e-14!86;UBERON:0001017!7.39e-13!82;UBERON:0000073!4.54e-12!94;UBERON:0001016!4.54e-12!94;UBERON:0001869!8.72e-12!32;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002619!1.87e-11!22;UBERON:0001893!2.34e-11!34;UBERON:0003080!4.09e-11!42;UBERON:0000956!6.99e-11!25;UBERON:0000203!6.99e-11!25;UBERON:0002791!8.94e-11!33;UBERON:0002780!1.01e-10!41;UBERON:0001890!1.01e-10!41;UBERON:0006240!1.01e-10!41;UBERON:0001950!1.04e-10!20;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0003075!1.89e-10!86;UBERON:0007284!1.89e-10!86;UBERON:0002020!1.94e-10!34;UBERON:0003528!1.94e-10!34;UBERON:0003056!3.59e-10!61;UBERON:0002346!7.23e-10!90;UBERON:0002616!1.78e-09!59;UBERON:0000062!3.74e-09!511;UBERON:0000033!7.19e-09!123;UBERON:0000467!2.04e-08!625;UBERON:0000153!2.45e-08!129;UBERON:0007811!2.45e-08!129;UBERON:0000480!3.08e-08!626;UBERON:0004121!1.84e-07!169;UBERON:0000468!2.34e-07!659;UBERON:0000924!3.28e-07!173;UBERON:0006601!3.28e-07!173;UBERON:0000923!5.81e-07!604;UBERON:0005291!5.81e-07!604;UBERON:0006598!5.81e-07!604;UBERON:0002532!5.81e-07!604;UBERON:0002050!8.40e-07!605;UBERON:0005423!8.40e-07!605;UBERON:0000922!9.69e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.21e-15;22!UBERON:0001950;1.74e-14;20!UBERON:0000956;1.12e-13;25!UBERON:0000203;1.12e-13;25!UBERON:0001869;1.59e-13;32!UBERON:0002791;2.69e-12;32!UBERON:0001893;5.32e-12;34!UBERON:0003528;4.58e-11;34!UBERON:0002020;4.58e-11;34!UBERON:0002780;2.38e-09;41!UBERON:0001890;2.38e-09;41!UBERON:0001737;5.89e-08;9!UBERON:0001557;5.89e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.21e-15;22!UBERON:0001950;1.74e-14;20!UBERON:0000956;1.12e-13;25!UBERON:0000203;1.12e-13;25!UBERON:0001869;1.59e-13;32!UBERON:0002791;2.69e-12;32!UBERON:0001893;5.32e-12;34!UBERON:0003528;4.58e-11;34!UBERON:0002020;4.58e-11;34!UBERON:0002780;2.38e-09;41!UBERON:0001890;2.38e-09;41!UBERON:0001737;5.89e-08;9!UBERON:0001557;5.89e-08;9 | ||
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| ||
|short_description=p2@NOV | |short_description=p2@NOV | ||
}} | }} |
Latest revision as of 21:23, 15 September 2015
Short description: | p2@NOV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOV_5end |
Coexpression cluster: | C4722_osteosarcoma_Neutrophils_aorta_Melanocyte_melanoma_Eosinophils_medial |
Association with transcript: | -47bp_to_ENST00000520082_5end |
EntrezGene: | NOV |
HGNC: | 7885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.30e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.80e-18 | 114 |
regional part of cerebral cortex | 1.46e-15 | 22 |
cerebral hemisphere | 3.37e-15 | 32 |
neocortex | 1.52e-14 | 20 |
cerebral cortex | 9.53e-14 | 25 |
pallium | 9.53e-14 | 25 |
telencephalon | 1.04e-13 | 34 |
regional part of telencephalon | 1.23e-13 | 32 |
regional part of forebrain | 9.13e-13 | 41 |
forebrain | 9.13e-13 | 41 |
anterior neural tube | 9.13e-13 | 41 |
future forebrain | 9.13e-13 | 41 |
central nervous system | 1.41e-12 | 81 |
brain grey matter | 2.83e-12 | 34 |
gray matter | 2.83e-12 | 34 |
pre-chordal neural plate | 1.17e-11 | 61 |
neural tube | 7.67e-11 | 56 |
neural rod | 7.67e-11 | 56 |
future spinal cord | 7.67e-11 | 56 |
neural keel | 7.67e-11 | 56 |
regional part of nervous system | 2.38e-10 | 53 |
regional part of brain | 2.38e-10 | 53 |
neural plate | 2.40e-10 | 82 |
presumptive neural plate | 2.40e-10 | 82 |
nervous system | 3.30e-10 | 89 |
brain | 1.22e-09 | 68 |
future brain | 1.22e-09 | 68 |
neurectoderm | 3.38e-09 | 86 |
structure with developmental contribution from neural crest | 5.06e-09 | 132 |
larynx | 5.28e-08 | 9 |
ecto-epithelium | 6.14e-07 | 104 |