FFCP PHASE1:Hg19::chr4:144106063..144106078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84640 | |EntrezGene=84640 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20067 | |HGNC=20067 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCV1,Q8NB14 | |UniProt=Q3ZCV1,Q8NB14 | ||
|association_with_transcript=0bp_to_ENST00000510377,NM_032557,uc003ija.3,uc003ijb.2,uc003ijc.2_5end | |association_with_transcript=0bp_to_ENST00000510377,NM_032557,uc003ija.3,uc003ijb.2,uc003ijc.2_5end | ||
|cluster_id=chr4:144106063..144106078,+ | |||
|description=CAGE_peak_2_at_USP38_5end | |description=CAGE_peak_2_at_USP38_5end | ||
|id=chr4:144106063..144106078,+ | |id=chr4:144106063..144106078,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.15e-37!140;CL:0000037!4.83e-36!172;CL:0000566!4.83e-36!172;CL:0002032!5.37e-33!165;CL:0000837!5.37e-33!165;CL:0002031!1.31e-30!124;CL:0000988!1.45e-30!182;CL:0002087!3.65e-29!119;CL:0000766!1.99e-20!76;CL:0002057!2.03e-20!42;CL:0000860!6.40e-20!45;CL:0000763!1.13e-19!112;CL:0000049!1.13e-19!112;CL:0000557!1.44e-17!71;CL:0000839!2.70e-17!70;CL:0002009!2.08e-16!65;CL:0002194!2.17e-15!63;CL:0000576!2.17e-15!63;CL:0000040!2.17e-15!63;CL:0000559!2.17e-15!63;CL:0000542!2.00e-12!53;CL:0000051!2.00e-12!53;CL:0000838!4.45e-12!52 | |ontology_enrichment_celltype=CL:0000738!7.15e-37!140;CL:0000037!4.83e-36!172;CL:0000566!4.83e-36!172;CL:0002032!5.37e-33!165;CL:0000837!5.37e-33!165;CL:0002031!1.31e-30!124;CL:0000988!1.45e-30!182;CL:0002087!3.65e-29!119;CL:0000766!1.99e-20!76;CL:0002057!2.03e-20!42;CL:0000860!6.40e-20!45;CL:0000763!1.13e-19!112;CL:0000049!1.13e-19!112;CL:0000557!1.44e-17!71;CL:0000839!2.70e-17!70;CL:0002009!2.08e-16!65;CL:0002194!2.17e-15!63;CL:0000576!2.17e-15!63;CL:0000040!2.17e-15!63;CL:0000559!2.17e-15!63;CL:0000542!2.00e-12!53;CL:0000051!2.00e-12!53;CL:0000838!4.45e-12!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.39e-17;33!CL:0002057;3.39e-17;33!CL:0000576;7.34e-13;48!CL:0000473;5.73e-12;39!CL:0000234;5.73e-12;39!CL:0002087;6.39e-10;104!CL:0000766;1.15e-09;69!CL:0000738;2.11e-08;136!CL:0000542;1.29e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.17e-37,136;CL:0000037,9.08e-37,168;CL:0002032,1.08e-33,161;CL:0000837,1.08e-33,161;CL:0000988,6.42e-32,177;CL:0002031,2.36e-31,120;CL:0002087,6.64e-30,115;CL:0000766,2.85e-21,72;CL:0000860,1.84e-20,42;CL:0002057,1.84e-20,42;CL:0000763,2.66e-20,108;CL:0000049,2.66e-20,108;CL:0000557,2.46e-18,67;CL:0000839,4.65e-18,66;CL:0002009,3.42e-17,61;CL:0000473,3.52e-17,48;CL:0000234,3.52e-17,48;CL:0002194,3.83e-16,59;CL:0000576,3.83e-16,59;CL:0000040,3.83e-16,59;CL:0000559,3.83e-16,59;CL:0000542,1.88e-12,53;CL:0000051,1.88e-12,53;CL:0000838,4.20e-12,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-15;42!CL:0000051;1.29e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.52e-15!102;UBERON:0003061!8.52e-15!102;UBERON:0002371!2.71e-13!80;UBERON:0001474!1.74e-12!86;UBERON:0002193!6.50e-12!112;UBERON:0002405!2.70e-10!115;UBERON:0004765!2.38e-09!101;UBERON:0001434!2.38e-09!101;UBERON:0007023!7.76e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!8.52e-15!102;UBERON:0003061!8.52e-15!102;UBERON:0002371!2.71e-13!80;UBERON:0001474!1.74e-12!86;UBERON:0002193!6.50e-12!112;UBERON:0002405!2.70e-10!115;UBERON:0004765!2.38e-09!101;UBERON:0001434!2.38e-09!101;UBERON:0007023!7.76e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.32e-15,98;UBERON:0003061,4.32e-15,98;UBERON:0002371,1.27e-13,76;UBERON:0001474,1.02e-12,82;UBERON:0002193,3.92e-12,108;UBERON:0002405,7.56e-12,93;UBERON:0004765,1.17e-10,90;UBERON:0001434,4.56e-09,100;UBERON:0007023,1.18e-08,114 | |||
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| ||
|short_description=p2@USP38 | |short_description=p2@USP38 | ||
}} | }} |
Latest revision as of 21:23, 15 September 2015
Short description: | p2@USP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000510377, NM_032557, uc003ija.3, uc003ijb.2, uc003ijc.2_5end |
EntrezGene: | USP38 |
HGNC: | 20067 |
UniProt: | Q3ZCV1Q8NB14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.17e-37 | 136 |
hematopoietic stem cell | 9.08e-37 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-33 | 161 |
hematopoietic cell | 6.42e-32 | 177 |
hematopoietic lineage restricted progenitor cell | 2.36e-31 | 120 |
nongranular leukocyte | 6.64e-30 | 115 |
myeloid leukocyte | 2.85e-21 | 72 |
classical monocyte | 1.84e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-20 | 42 |
myeloid cell | 2.66e-20 | 108 |
common myeloid progenitor | 2.66e-20 | 108 |
granulocyte monocyte progenitor cell | 2.46e-18 | 67 |
myeloid lineage restricted progenitor cell | 4.65e-18 | 66 |
macrophage dendritic cell progenitor | 3.42e-17 | 61 |
defensive cell | 3.52e-17 | 48 |
phagocyte | 3.52e-17 | 48 |
monopoietic cell | 3.83e-16 | 59 |
monocyte | 3.83e-16 | 59 |
monoblast | 3.83e-16 | 59 |
promonocyte | 3.83e-16 | 59 |
lymphocyte | 1.88e-12 | 53 |
common lymphoid progenitor | 1.88e-12 | 53 |
lymphoid lineage restricted progenitor cell | 4.20e-12 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.32e-15 | 98 |
blood island | 4.32e-15 | 98 |
bone marrow | 1.27e-13 | 76 |
bone element | 1.02e-12 | 82 |
hemolymphoid system | 3.92e-12 | 108 |
immune system | 7.56e-12 | 93 |
skeletal element | 1.17e-10 | 90 |
skeletal system | 4.56e-09 | 100 |
adult organism | 1.18e-08 | 114 |