FFCP PHASE1:Hg19::chr6:144508798..144508809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8676 | |EntrezGene=8676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11429 | |HGNC=11429 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_AJ012501_5end | |association_with_transcript=-118bp_to_AJ012501_5end | ||
|cluster_id=chr6:144508798..144508809,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_10_at_STX11_5end | |description=CAGE_peak_10_at_STX11_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.92e-57!42;CL:0000860!1.24e-52!45;CL:0000766!3.33e-51!76;CL:0000738!2.34e-44!140;CL:0002009!7.22e-41!65;CL:0000557!2.02e-40!71;CL:0002194!3.20e-40!63;CL:0000576!3.20e-40!63;CL:0000040!3.20e-40!63;CL:0000559!3.20e-40!63;CL:0000839!5.42e-39!70;CL:0000763!1.40e-34!112;CL:0000049!1.40e-34!112;CL:0000988!1.67e-33!182;CL:0002087!2.67e-33!119;CL:0002031!9.91e-33!124;CL:0000037!1.19e-32!172;CL:0000566!1.19e-32!172;CL:0002032!4.46e-32!165;CL:0000837!4.46e-32!165;CL:0000094!6.84e-13!8;CL:0000081!1.35e-11!11;CL:0002393!2.86e-10!9;CL:0002397!2.86e-10!9;CL:0000134!8.85e-09!358;CL:0002320!2.67e-08!365;CL:0000775!1.03e-07!3;CL:0000080!1.52e-07!6;CL:0000219!1.83e-07!390;CL:0000767!7.75e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.92e-57!42;CL:0000860!1.24e-52!45;CL:0000766!3.33e-51!76;CL:0000738!2.34e-44!140;CL:0002009!7.22e-41!65;CL:0000557!2.02e-40!71;CL:0002194!3.20e-40!63;CL:0000576!3.20e-40!63;CL:0000040!3.20e-40!63;CL:0000559!3.20e-40!63;CL:0000839!5.42e-39!70;CL:0000763!1.40e-34!112;CL:0000049!1.40e-34!112;CL:0000988!1.67e-33!182;CL:0002087!2.67e-33!119;CL:0002031!9.91e-33!124;CL:0000037!1.19e-32!172;CL:0000566!1.19e-32!172;CL:0002032!4.46e-32!165;CL:0000837!4.46e-32!165;CL:0000094!6.84e-13!8;CL:0000081!1.35e-11!11;CL:0002393!2.86e-10!9;CL:0002397!2.86e-10!9;CL:0000134!8.85e-09!358;CL:0002320!2.67e-08!365;CL:0000775!1.03e-07!3;CL:0000080!1.52e-07!6;CL:0000219!1.83e-07!390;CL:0000767!7.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-68;33!CL:0002057;1.56e-68;33!CL:0000473;1.35e-58;39!CL:0000234;1.35e-58;39!CL:0000576;3.92e-40;48!CL:0000766;2.64e-33;69!CL:0000775;2.01e-21;3!CL:0000763;4.53e-15;100!CL:0000094;3.68e-14;8!CL:0000081;2.47e-10;11!CL:0000738;2.37e-08;136!CL:0002087;1.29e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.56e-68;33!CL:0002057;1.56e-68;33!CL:0000473;1.35e-58;39!CL:0000234;1.35e-58;39!CL:0000576;3.92e-40;48!CL:0000766;2.64e-33;69!CL:0000775;2.01e-21;3!CL:0000763;4.53e-15;100!CL:0000094;3.68e-14;8!CL:0000081;2.47e-10;11!CL:0000738;2.37e-08;136!CL:0002087;1.29e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.28e-69,48;CL:0000234,3.28e-69,48;CL:0000860,4.70e-66,42;CL:0002057,4.70e-66,42;CL:0000766,2.23e-62,72;CL:0002194,1.58e-54,59;CL:0000576,1.58e-54,59;CL:0000040,1.58e-54,59;CL:0000559,1.58e-54,59;CL:0002009,1.25e-52,61;CL:0000839,2.19e-48,66;CL:0000557,1.30e-47,67;CL:0000763,2.95e-40,108;CL:0000049,2.95e-40,108;CL:0000738,4.52e-31,136;CL:0002087,4.00e-26,115;CL:0002032,1.52e-25,161;CL:0000837,1.52e-25,161;CL:0002031,7.27e-25,120;CL:0000037,2.73e-24,168;CL:0000988,8.07e-23,177;CL:0000775,2.24e-21,3;CL:0000094,3.88e-14,8;CL:0000081,2.56e-10,11;CL:0000134,5.52e-09,354;CL:0002320,1.03e-08,361;CL:0000219,9.34e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.07e-50;42!CL:0000049;1.72e-13;108 | |ontology_enrichment_development_v019=CL:0002057;5.07e-50;42!CL:0000049;1.72e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.34e-44!102;UBERON:0003061!3.34e-44!102;UBERON:0002193!2.77e-42!112;UBERON:0002371!3.00e-36!80;UBERON:0001474!8.27e-33!86;UBERON:0002405!2.58e-26!115;UBERON:0004765!5.15e-26!101;UBERON:0001434!5.15e-26!101;UBERON:0003081!4.25e-15!216;UBERON:0002204!2.39e-13!167;UBERON:0000178!3.37e-11!15;UBERON:0000179!3.37e-11!15;UBERON:0000463!3.37e-11!15;UBERON:0002384!4.17e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!3.34e-44!102;UBERON:0003061!3.34e-44!102;UBERON:0002193!2.77e-42!112;UBERON:0002371!3.00e-36!80;UBERON:0001474!8.27e-33!86;UBERON:0002405!2.58e-26!115;UBERON:0004765!5.15e-26!101;UBERON:0001434!5.15e-26!101;UBERON:0003081!4.25e-15!216;UBERON:0002204!2.39e-13!167;UBERON:0000178!3.37e-11!15;UBERON:0000179!3.37e-11!15;UBERON:0000463!3.37e-11!15;UBERON:0002384!4.17e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-41,76;UBERON:0001474,3.11e-38,82;UBERON:0002390,1.96e-37,98;UBERON:0003061,1.96e-37,98;UBERON:0004765,1.71e-34,90;UBERON:0002193,1.39e-33,108;UBERON:0002405,2.96e-33,93;UBERON:0001434,1.19e-30,100;UBERON:0002204,1.12e-16,167;UBERON:0003081,8.53e-16,203;UBERON:0000926,1.62e-08,315;UBERON:0004120,1.62e-08,315;UBERON:0006603,1.62e-08,315;UBERON:0002384,2.42e-08,371 | |||
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| ||
|short_description=p10@STX11 | |short_description=p10@STX11 | ||
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Latest revision as of 21:22, 15 September 2015
Short description: | p10@STX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_STX11_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -118bp_to_AJ012501_5end |
EntrezGene: | STX11 |
HGNC: | 11429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.28e-69 | 48 |
phagocyte | 3.28e-69 | 48 |
classical monocyte | 4.70e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.70e-66 | 42 |
myeloid leukocyte | 2.23e-62 | 72 |
monopoietic cell | 1.58e-54 | 59 |
monocyte | 1.58e-54 | 59 |
monoblast | 1.58e-54 | 59 |
promonocyte | 1.58e-54 | 59 |
macrophage dendritic cell progenitor | 1.25e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.19e-48 | 66 |
granulocyte monocyte progenitor cell | 1.30e-47 | 67 |
myeloid cell | 2.95e-40 | 108 |
common myeloid progenitor | 2.95e-40 | 108 |
leukocyte | 4.52e-31 | 136 |
nongranular leukocyte | 4.00e-26 | 115 |
hematopoietic oligopotent progenitor cell | 1.52e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-25 | 161 |
hematopoietic lineage restricted progenitor cell | 7.27e-25 | 120 |
hematopoietic stem cell | 2.73e-24 | 168 |
hematopoietic cell | 8.07e-23 | 177 |
neutrophil | 2.24e-21 | 3 |
granulocyte | 3.88e-14 | 8 |
blood cell | 2.56e-10 | 11 |
mesenchymal cell | 5.52e-09 | 354 |
connective tissue cell | 1.03e-08 | 361 |
motile cell | 9.34e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-41 | 76 |
bone element | 3.11e-38 | 82 |
hematopoietic system | 1.96e-37 | 98 |
blood island | 1.96e-37 | 98 |
skeletal element | 1.71e-34 | 90 |
hemolymphoid system | 1.39e-33 | 108 |
immune system | 2.96e-33 | 93 |
skeletal system | 1.19e-30 | 100 |
musculoskeletal system | 1.12e-16 | 167 |
lateral plate mesoderm | 8.53e-16 | 203 |
mesoderm | 1.62e-08 | 315 |
mesoderm-derived structure | 1.62e-08 | 315 |
presumptive mesoderm | 1.62e-08 | 315 |
connective tissue | 2.42e-08 | 371 |