FFCP PHASE1:Hg19::chr11:117103441..117103451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257160 | |EntrezGene=257160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25335 | |HGNC=25335 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTD1,B2RUW0,Q8ND24 | |UniProt=B4DTD1,B2RUW0,Q8ND24 | ||
|association_with_transcript=0bp_to_ENST00000531287,ENST00000531452,NM_001077239,uc001pqu.2,uc010rxf.1_5end | |association_with_transcript=0bp_to_ENST00000531287,ENST00000531452,NM_001077239,uc001pqu.2,uc010rxf.1_5end | ||
|cluster_id=chr11:117103441..117103451,+ | |||
|description=CAGE_peak_3_at_RNF214_5end | |description=CAGE_peak_3_at_RNF214_5end | ||
|id=chr11:117103441..117103451,+ | |id=chr11:117103441..117103451,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.37e-08!254;CL:0002076!1.19e-07!43;CL:0002251!2.89e-07!21;CL:0000223!4.53e-07!59 | |ontology_enrichment_celltype=CL:0000066!6.37e-08!254;CL:0002076!1.19e-07!43;CL:0002251!2.89e-07!21;CL:0000223!4.53e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000228;6.95e-12;1!CL:0002372;6.95e-12;1!CL:0002563;1.72e-11;4!CL:0000622;2.26e-09;5!CL:0002251;1.19e-08;20!CL:0000154;5.93e-08;6 | |ontology_enrichment_celltype_v019=CL:0000228;6.95e-12;1!CL:0002372;6.95e-12;1!CL:0002563;1.72e-11;4!CL:0000622;2.26e-09;5!CL:0002251;1.19e-08;20!CL:0000154;5.93e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.26e-12,1;CL:0002372,6.26e-12,1;CL:0002563,1.47e-11,4;CL:0000622,1.76e-09,5;CL:0002251,1.35e-08,20;CL:0000154,4.82e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.95e-12;1!UBERON:0009117;4.65e-10;10!UBERON:0005564;4.65e-10;10 | |ontology_enrichment_development_v019=UBERON:0008801;6.95e-12;1!UBERON:0009117;4.65e-10;10!UBERON:0005564;4.65e-10;10 | ||
|ontology_enrichment_disease=DOID:305!1.57e-07!106 | |ontology_enrichment_disease=DOID:305!1.57e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.86e-08!169;UBERON:0000925!6.86e-08!169;UBERON:0006595!6.86e-08!169;UBERON:0001007!5.69e-07!155;UBERON:0001555!5.69e-07!155;UBERON:0007026!5.69e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!6.86e-08!169;UBERON:0000925!6.86e-08!169;UBERON:0006595!6.86e-08!169;UBERON:0001007!5.69e-07!155;UBERON:0001555!5.69e-07!155;UBERON:0007026!5.69e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.95e-12;8!UBERON:0001831;6.95e-12;1!UBERON:0001567;6.95e-12;1!UBERON:0001242;1.72e-11;4!UBERON:0001262;1.72e-11;4!UBERON:0004786;1.72e-11;4!UBERON:0004808;1.72e-11;4!UBERON:0001277;1.72e-11;4!UBERON:0003135;3.42e-09;11!UBERON:0001044;5.93e-08;6!UBERON:0003293;5.93e-08;6!UBERON:0003294;5.93e-08;6!UBERON:0010047;5.93e-08;6!UBERON:0003408;5.93e-08;6!UBERON:0000167;5.93e-08;6!UBERON:0001041;2.51e-07;14!UBERON:0004921;5.83e-07;33!UBERON:0000485;6.19e-07;7!UBERON:0003929;6.19e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.95e-12;8!UBERON:0001831;6.95e-12;1!UBERON:0001567;6.95e-12;1!UBERON:0001242;1.72e-11;4!UBERON:0001262;1.72e-11;4!UBERON:0004786;1.72e-11;4!UBERON:0004808;1.72e-11;4!UBERON:0001277;1.72e-11;4!UBERON:0003135;3.42e-09;11!UBERON:0001044;5.93e-08;6!UBERON:0003293;5.93e-08;6!UBERON:0003294;5.93e-08;6!UBERON:0010047;5.93e-08;6!UBERON:0003408;5.93e-08;6!UBERON:0000167;5.93e-08;6!UBERON:0001041;2.51e-07;14!UBERON:0004921;5.83e-07;33!UBERON:0000485;6.19e-07;7!UBERON:0003929;6.19e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.27e-12,8;UBERON:0001831,1.19e-11,1;UBERON:0001567,1.19e-11,1;UBERON:0008801,1.19e-11,1;UBERON:0001242,1.47e-11,4;UBERON:0001262,1.47e-11,4;UBERON:0004786,1.47e-11,4;UBERON:0004808,1.47e-11,4;UBERON:0001277,1.47e-11,4;UBERON:0003135,2.52e-09,11;UBERON:0001044,7.08e-08,6;UBERON:0003293,7.08e-08,6;UBERON:0003294,7.08e-08,6;UBERON:0010047,7.08e-08,6;UBERON:0000167,7.08e-08,6 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0.154934401160603,0.568676929949686,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.334372990781356,0,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.541607727530031,0.25618263945135,0,0,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0.602300476311091,0.383959833463255,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0.087834785693126,0.72038491523742,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0,0.717558542755448,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0.292311015483596,0,0,0.161646056818812,0.355009592516614,0,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0,0.397589304964456,0.116193942869518,0,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,1.18157981336281,0,1.22988438543114,0.171567810298526,0.329250856225877,0,0.201057944823262,0.740707561268237,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0,0,0,0.106727557803444,0.606255142892519,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0.164254312027618,0,0.232420756919918,0.483437798366489,0,0.368323955743585,0.34444334449382,0.182091168006717,0,0.451199612907412,0.308061348417659,0.784349769176855,1.46139224653261,0.422206515571503,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0.0915694648183434,0.082509499920588,1.72279661398852,0.650060246036521,0,0.386682873168488,0.154048617114644,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0.699869440489966,0.673554789078584,0,0,0.564862804660675,0,0,0.886860307073351,0.229723400206959,0,1.52927441428475,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0.142283686696828,0.478278818186467,0.199579371432817,0,0,0.649243880549111,0,0,0,0,0.677167111206413,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0.71623345421307,0.296964680832639,1.84296421259539,0,0.422008249231538,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0.251932747854276,0.511343412510774,0.123084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0.524759999977174,0,0.568967241427498,0.762760950878299,0,0,0.291604613383254,0.347249989866585,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0.435753854075961,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0.470940769185074,0,0.225595660617181,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0.163232808159148,1.69623685720729,0.649165919226273,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215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| ||
|short_description=p3@RNF214 | |short_description=p3@RNF214 | ||
}} | }} |
Latest revision as of 21:21, 15 September 2015
Short description: | p3@RNF214 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF214_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531287, ENST00000531452, NM_001077239, uc001pqu.2, uc010rxf.1_5end |
EntrezGene: | RNF214 |
HGNC: | 25335 |
UniProt: | B4DTD1B2RUW0Q8ND24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.26e-12 | 1 |
myotube | 6.26e-12 | 1 |
intestinal epithelial cell | 1.47e-11 | 4 |
acinar cell | 1.76e-09 | 5 |
epithelial cell of alimentary canal | 1.35e-08 | 20 |
protein secreting cell | 4.82e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.27e-12 | 8 |
parotid gland | 1.19e-11 | 1 |
cheek | 1.19e-11 | 1 |
parotid gland primordium | 1.19e-11 | 1 |
intestinal mucosa | 1.47e-11 | 4 |
wall of intestine | 1.47e-11 | 4 |
gastrointestinal system mucosa | 1.47e-11 | 4 |
gastrointestinal system epithelium | 1.47e-11 | 4 |
intestinal epithelium | 1.47e-11 | 4 |
male reproductive organ | 2.52e-09 | 11 |
saliva-secreting gland | 7.08e-08 | 6 |
gland of oral region | 7.08e-08 | 6 |
gland of foregut | 7.08e-08 | 6 |
oral gland | 7.08e-08 | 6 |
oral cavity | 7.08e-08 | 6 |