FFCP PHASE1:Hg19::chr19:12912657..12912669,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12912657..12912669,-
|short_description=p2@PRDX2
|description=CAGE_peak_2_at_PRDX2_5end
|association_with_transcript=3bp_to_ENST00000301522_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7001 | |EntrezGene=7001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9353 | |HGNC=9353 | ||
|TSSclassifier=strong | |||
|UniProt=P32119 | |UniProt=P32119 | ||
|association_with_transcript=3bp_to_ENST00000301522_5end | |||
|cluster_id=chr19:12912657..12912669,- | |||
|coexpression_cluster_id=C3751 | |||
|description=CAGE_peak_2_at_PRDX2_5end | |||
|id=chr19:12912657..12912669,- | |||
|ontology_enrichment_celltype=CL:0000393!2.79e-14!60;CL:0000211!2.79e-14!60;CL:0002321!4.44e-14!248;CL:0000183!2.42e-13!59;CL:0000220!2.55e-13!246;CL:0000222!2.50e-12!119;CL:0000192!1.35e-11!42;CL:0000514!1.35e-11!42;CL:0000187!2.34e-11!54;CL:0000055!7.61e-11!180;CL:0000680!8.51e-11!57;CL:0000056!8.51e-11!57;CL:0000355!8.51e-11!57;CL:0000359!1.68e-09!32;CL:0000221!1.09e-08!71;CL:0000133!1.08e-07!59;CL:1000449!9.28e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.35e-09;32!CL:0000192;6.74e-08;43!CL:1000449;2.44e-07;15!CL:1000497;3.18e-07;17!CL:0002518;3.18e-07;17!CL:0000393;3.45e-07;61!CL:0000211;3.45e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.32e-14,250;CL:0000393,6.34e-14,61;CL:0000211,6.34e-14,61;CL:0000222,2.92e-12,121;CL:0000192,3.33e-11,43;CL:0000514,3.33e-11,43;CL:0000187,4.85e-11,55;CL:0000680,1.66e-10,58;CL:0000056,1.66e-10,58;CL:0000355,1.66e-10,58;CL:0000359,1.68e-09,32;CL:0000221,5.97e-09,72;CL:0000133,1.05e-07,59;CL:1000449,2.56e-07,15;CL:1000497,3.36e-07,17;CL:0002518,3.36e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;6.74e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000019;2.28e-07;19!UBERON:0000047;2.28e-07;19!UBERON:0004088;2.28e-07;19!UBERON:0010230;2.28e-07;19!UBERON:0006555;2.44e-07;15!UBERON:0004819;2.44e-07;15!UBERON:0001285;2.44e-07;15!UBERON:0007684;2.44e-07;15!UBERON:0000970;2.54e-07;20!UBERON:0006554;2.71e-07;30!UBERON:0001008;2.71e-07;30!UBERON:0000956;4.96e-07;25!UBERON:0000203;4.96e-07;25!UBERON:0001456;5.46e-07;21!UBERON:0001869;7.82e-07;32!UBERON:0000020;7.87e-07;23 | |||
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| ||
|short_description=p2@PRDX2 | |||
}} | }} |
Latest revision as of 21:18, 15 September 2015
Short description: | p2@PRDX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRDX2_5end |
Coexpression cluster: | C3751_Mesenchymal_Renal_Reticulocytes_Alveolar_neuroblastoma_nonsmall_Neurons |
Association with transcript: | 3bp_to_ENST00000301522_5end |
EntrezGene: | PRDX2 |
HGNC: | 9353 |
UniProt: | P32119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.32e-14 | 250 |
electrically responsive cell | 6.34e-14 | 61 |
electrically active cell | 6.34e-14 | 61 |
mesodermal cell | 2.92e-12 | 121 |
smooth muscle cell | 3.33e-11 | 43 |
smooth muscle myoblast | 3.33e-11 | 43 |
muscle cell | 4.85e-11 | 55 |
muscle precursor cell | 1.66e-10 | 58 |
myoblast | 1.66e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-10 | 58 |
vascular associated smooth muscle cell | 1.68e-09 | 32 |
ectodermal cell | 5.97e-09 | 72 |
neurectodermal cell | 1.05e-07 | 59 |
epithelial cell of nephron | 2.56e-07 | 15 |
kidney cell | 3.36e-07 | 17 |
kidney epithelial cell | 3.36e-07 | 17 |