FFCP PHASE1:Hg19::chr19:12912626..12912647,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:12912626..12912647,- to FFCP PHASE1:Hg19::chr19:12912626..12912647,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7001 | |EntrezGene=7001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9353 | |HGNC=9353 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000466174_5end | |||
|cluster_id=chr19:12912626..12912647,- | |||
|coexpression_cluster_id=C3751 | |||
|description=CAGE_peak_3_at_PRDX2_5end | |||
|id=chr19:12912626..12912647,- | |||
|ontology_enrichment_celltype=CL:0002321!7.17e-11!248;CL:0000220!1.56e-10!246;CL:0000393!4.57e-10!60;CL:0000211!4.57e-10!60;CL:0000192!7.98e-10!42;CL:0000514!7.98e-10!42;CL:0000183!3.11e-09!59;CL:0000222!1.57e-08!119;CL:0000359!2.21e-08!32;CL:0000325!3.79e-08!39;CL:0000187!9.09e-08!54;CL:0000221!1.48e-07!71;CL:0000680!2.40e-07!57;CL:0000056!2.40e-07!57;CL:0000355!2.40e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.62e-08;32!CL:0000192;5.97e-07;43!CL:1000449;7.13e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.33e-11,250;CL:0000393,9.41e-10,61;CL:0000211,9.41e-10,61;CL:0000192,1.98e-09,43;CL:0000514,1.98e-09,43;CL:0000359,2.21e-08,32;CL:0000222,2.39e-08,121;CL:0000221,6.61e-08,72;CL:0000187,1.70e-07,55;CL:0000680,4.27e-07,58;CL:0000056,4.27e-07,58;CL:0000355,4.27e-07,58;CL:1000449,7.30e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.97e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!4.53e-20!309;UBERON:0000119!1.77e-19!312;UBERON:0000477!7.19e-18!286;UBERON:0000481!2.10e-17!347;UBERON:0000025!2.71e-15!194;UBERON:0004111!7.04e-15!241;UBERON:0000064!3.44e-13!219;UBERON:0000475!1.10e-11!365;UBERON:0003914!2.08e-11!118;UBERON:0000924!2.67e-11!173;UBERON:0006601!2.67e-11!173;UBERON:0003056!2.70e-11!61;UBERON:0002346!3.71e-11!90;UBERON:0004121!8.04e-11!169;UBERON:0003075!1.10e-10!86;UBERON:0007284!1.10e-10!86;UBERON:0002049!1.26e-10!79;UBERON:0007798!1.26e-10!79;UBERON:0000073!5.25e-10!94;UBERON:0001016!5.25e-10!94;UBERON:0005743!6.63e-10!86;UBERON:0004872!1.93e-09!84;UBERON:0000055!3.10e-09!69;UBERON:0001981!6.16e-09!60;UBERON:0007500!6.16e-09!60;UBERON:0004537!6.16e-09!60;UBERON:0006965!6.16e-09!60;UBERON:0001017!6.55e-09!82;UBERON:0001009!7.08e-09!113;UBERON:0000033!7.96e-09!123;UBERON:0000490!1.21e-08!138;UBERON:0000153!2.64e-08!129;UBERON:0007811!2.64e-08!129;UBERON:0005256!2.71e-08!143;UBERON:0001637!4.27e-08!42;UBERON:0003509!4.27e-08!42;UBERON:0004572!4.27e-08!42;UBERON:0004535!5.81e-08!110;UBERON:0001134!1.31e-07!61;UBERON:0002036!1.31e-07!61;UBERON:0003082!1.31e-07!61;UBERON:0000063!1.37e-07!97;UBERON:0003103!1.58e-07!69;UBERON:0002385!2.19e-07!63;UBERON:0001015!2.19e-07!63;UBERON:0000383!2.19e-07!63;UBERON:0000486!3.17e-07!82;UBERON:0004290!3.30e-07!70;UBERON:0001049!3.97e-07!57;UBERON:0005068!3.97e-07!57;UBERON:0006241!3.97e-07!57;UBERON:0007135!3.97e-07!57;UBERON:0000914!5.20e-07!83;UBERON:0002329!5.20e-07!83;UBERON:0003077!5.20e-07!83;UBERON:0003059!5.20e-07!83;UBERON:0007282!5.20e-07!83;UBERON:0009618!5.20e-07!83;UBERON:0007285!5.20e-07!83;UBERON:0000468!6.11e-07!659;UBERON:0002616!6.23e-07!59;UBERON:0000956!6.32e-07!25;UBERON:0000203!6.32e-07!25;UBERON:0004876!7.05e-07!20;UBERON:0000970!7.24e-07!20;UBERON:0001869!9.05e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.29e-07;25!UBERON:0000203;5.29e-07;25!UBERON:0003914;6.77e-07;74!UBERON:0006555;7.13e-07;15!UBERON:0004819;7.13e-07;15!UBERON:0001285;7.13e-07;15!UBERON:0007684;7.13e-07;15!UBERON:0000970;7.64e-07;20 | |||
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| ||
|short_description=p3@PRDX2 | |||
}} | }} |
Latest revision as of 21:16, 15 September 2015
Short description: | p3@PRDX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRDX2_5end |
Coexpression cluster: | C3751_Mesenchymal_Renal_Reticulocytes_Alveolar_neuroblastoma_nonsmall_Neurons |
Association with transcript: | -23bp_to_ENST00000466174_5end |
EntrezGene: | PRDX2 |
HGNC: | 9353 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.33e-11 | 250 |
electrically responsive cell | 9.41e-10 | 61 |
electrically active cell | 9.41e-10 | 61 |
smooth muscle cell | 1.98e-09 | 43 |
smooth muscle myoblast | 1.98e-09 | 43 |
vascular associated smooth muscle cell | 2.21e-08 | 32 |
mesodermal cell | 2.39e-08 | 121 |
ectodermal cell | 6.61e-08 | 72 |
muscle cell | 1.70e-07 | 55 |
muscle precursor cell | 4.27e-07 | 58 |
myoblast | 4.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-07 | 58 |
epithelial cell of nephron | 7.30e-07 | 15 |