FFCP PHASE1:Hg19::chr14:71788096..71788143,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:71788096..71788143,+ to FFCP PHASE1:Hg19::chr14:71788096..71788143,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26037 | |EntrezGene=26037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20284 | |HGNC=20284 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4Z3 | |UniProt=G3V4Z3 | ||
|association_with_transcript=0bp_to_ENST00000557151_5end | |||
|cluster_id=chr14:71788096..71788143,+ | |||
|coexpression_cluster_id=C1644 | |||
|description=CAGE_peak_3_at_SIPA1L1_5end | |||
|id=chr14:71788096..71788143,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-23!42;CL:0000860!2.92e-22!45;CL:0000738!1.18e-18!140;CL:0000766!3.43e-17!76;CL:0002031!2.87e-14!124;CL:0000557!5.76e-14!71;CL:0002087!6.31e-14!119;CL:0002009!1.26e-12!65;CL:0000839!4.94e-12!70;CL:0002194!5.05e-12!63;CL:0000576!5.05e-12!63;CL:0000040!5.05e-12!63;CL:0000559!5.05e-12!63;CL:0002032!2.91e-07!165;CL:0000837!2.91e-07!165;CL:0000037!5.95e-07!172;CL:0000566!5.95e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-18;33!CL:0002057;2.17e-18;33!CL:0000576;5.97e-12;48!CL:0000473;8.58e-11;39!CL:0000234;8.58e-11;39!CL:0000766;8.46e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.44e-25,42;CL:0002057,4.44e-25,42;CL:0000738,2.30e-20,136;CL:0000473,1.19e-18,48;CL:0000234,1.19e-18,48;CL:0000766,1.47e-18,72;CL:0002031,2.79e-15,120;CL:0000557,5.26e-15,67;CL:0002087,6.36e-15,115;CL:0002009,1.49e-13,61;CL:0000839,4.69e-13,66;CL:0002194,6.78e-13,59;CL:0000576,6.78e-13,59;CL:0000040,6.78e-13,59;CL:0000559,6.78e-13,59;CL:0002032,9.23e-10,161;CL:0000837,9.23e-10,161;CL:0000037,1.65e-09,168;CL:0000988,8.98e-08,177;CL:0000763,2.86e-07,108;CL:0000049,2.86e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.95e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-15!102;UBERON:0003061!1.12e-15!102;UBERON:0007023!4.62e-14!115;UBERON:0002780!1.61e-13!41;UBERON:0001890!1.61e-13!41;UBERON:0006240!1.61e-13!41;UBERON:0003080!2.64e-13!42;UBERON:0002371!4.96e-13!80;UBERON:0001869!7.10e-13!32;UBERON:0001893!1.99e-12!34;UBERON:0001474!4.34e-12!86;UBERON:0002193!4.36e-12!112;UBERON:0002020!6.13e-12!34;UBERON:0003528!6.13e-12!34;UBERON:0004765!7.05e-12!101;UBERON:0001434!7.05e-12!101;UBERON:0002791!7.40e-12!33;UBERON:0001049!8.25e-12!57;UBERON:0005068!8.25e-12!57;UBERON:0006241!8.25e-12!57;UBERON:0007135!8.25e-12!57;UBERON:0002619!3.03e-10!22;UBERON:0002204!3.15e-10!167;UBERON:0002616!5.82e-10!59;UBERON:0001950!3.79e-09!20;UBERON:0000956!4.46e-09!25;UBERON:0000203!4.46e-09!25;UBERON:0000955!9.20e-08!69;UBERON:0006238!9.20e-08!69;UBERON:0003056!1.67e-07!61;UBERON:0002405!3.12e-07!115;UBERON:0001017!4.64e-07!82;UBERON:0003075!8.80e-07!86;UBERON:0007284!8.80e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.32e-12;32!UBERON:0001893;1.64e-11;34!UBERON:0002791;4.22e-11;32!UBERON:0003528;7.37e-11;34!UBERON:0002020;7.37e-11;34!UBERON:0002619;1.99e-10;22!UBERON:0002780;4.30e-10;41!UBERON:0001890;4.30e-10;41!UBERON:0001950;3.09e-09;20!UBERON:0000956;5.47e-09;25!UBERON:0000203;5.47e-09;25!UBERON:0000073;1.93e-07;53!UBERON:0002616;1.93e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.41e-16,98;UBERON:0003061,7.41e-16,98;UBERON:0002371,9.20e-14,76;UBERON:0002780,2.74e-13,41;UBERON:0001890,2.74e-13,41;UBERON:0003080,2.74e-13,41;UBERON:0006240,2.74e-13,41;UBERON:0002193,8.21e-13,108;UBERON:0001869,9.44e-13,32;UBERON:0007023,1.71e-12,114;UBERON:0001893,2.57e-12,34;UBERON:0001474,2.76e-12,82;UBERON:0000073,5.03e-12,53;UBERON:0002616,5.03e-12,53;UBERON:0001049,5.14e-12,56;UBERON:0005068,5.14e-12,56;UBERON:0006241,5.14e-12,56;UBERON:0007135,5.14e-12,56;UBERON:0003528,8.24e-12,34;UBERON:0002020,8.24e-12,34;UBERON:0002791,1.04e-11,32;UBERON:0004765,3.99e-11,90;UBERON:0001434,2.02e-10,100;UBERON:0002619,2.74e-10,22;UBERON:0002405,5.72e-10,93;UBERON:0001950,4.08e-09,20;UBERON:0002204,6.28e-09,167;UBERON:0000956,9.84e-09,25;UBERON:0000203,9.84e-09,25;UBERON:0000955,3.41e-08,68;UBERON:0006238,3.41e-08,68;UBERON:0001017,1.56e-07,81;UBERON:0003056,8.84e-07,61 | |||
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| ||
|short_description=p3@SIPA1L1 | |||
}} | }} |
Latest revision as of 21:13, 15 September 2015
Short description: | p3@SIPA1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIPA1L1_5end |
Coexpression cluster: | C1644_Neutrophils_Eosinophils_medial_amygdala_frontal_paracentral_insula |
Association with transcript: | 0bp_to_ENST00000557151_5end |
EntrezGene: | SIPA1L1 |
HGNC: | 20284 |
UniProt: | G3V4Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.44e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.44e-25 | 42 |
leukocyte | 2.30e-20 | 136 |
defensive cell | 1.19e-18 | 48 |
phagocyte | 1.19e-18 | 48 |
myeloid leukocyte | 1.47e-18 | 72 |
hematopoietic lineage restricted progenitor cell | 2.79e-15 | 120 |
granulocyte monocyte progenitor cell | 5.26e-15 | 67 |
nongranular leukocyte | 6.36e-15 | 115 |
macrophage dendritic cell progenitor | 1.49e-13 | 61 |
myeloid lineage restricted progenitor cell | 4.69e-13 | 66 |
monopoietic cell | 6.78e-13 | 59 |
monocyte | 6.78e-13 | 59 |
monoblast | 6.78e-13 | 59 |
promonocyte | 6.78e-13 | 59 |
hematopoietic oligopotent progenitor cell | 9.23e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.23e-10 | 161 |
hematopoietic stem cell | 1.65e-09 | 168 |
hematopoietic cell | 8.98e-08 | 177 |
myeloid cell | 2.86e-07 | 108 |
common myeloid progenitor | 2.86e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.41e-16 | 98 |
blood island | 7.41e-16 | 98 |
bone marrow | 9.20e-14 | 76 |
regional part of forebrain | 2.74e-13 | 41 |
forebrain | 2.74e-13 | 41 |
anterior neural tube | 2.74e-13 | 41 |
future forebrain | 2.74e-13 | 41 |
hemolymphoid system | 8.21e-13 | 108 |
cerebral hemisphere | 9.44e-13 | 32 |
adult organism | 1.71e-12 | 114 |
telencephalon | 2.57e-12 | 34 |
bone element | 2.76e-12 | 82 |
regional part of nervous system | 5.03e-12 | 53 |
regional part of brain | 5.03e-12 | 53 |
neural tube | 5.14e-12 | 56 |
neural rod | 5.14e-12 | 56 |
future spinal cord | 5.14e-12 | 56 |
neural keel | 5.14e-12 | 56 |
brain grey matter | 8.24e-12 | 34 |
gray matter | 8.24e-12 | 34 |
regional part of telencephalon | 1.04e-11 | 32 |
skeletal element | 3.99e-11 | 90 |
skeletal system | 2.02e-10 | 100 |
regional part of cerebral cortex | 2.74e-10 | 22 |
immune system | 5.72e-10 | 93 |
neocortex | 4.08e-09 | 20 |
musculoskeletal system | 6.28e-09 | 167 |
cerebral cortex | 9.84e-09 | 25 |
pallium | 9.84e-09 | 25 |
brain | 3.41e-08 | 68 |
future brain | 3.41e-08 | 68 |
central nervous system | 1.56e-07 | 81 |
pre-chordal neural plate | 8.84e-07 | 61 |