FFCP PHASE1:Hg19::chrX:48931650..48931681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11230 | |EntrezGene=11230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28911 | |HGNC=28911 | ||
|TSSclassifier=strong | |||
|UniProt=O60831 | |UniProt=O60831 | ||
|association_with_transcript=0bp_to_NM_007213,uc004dmi.2_5end | |association_with_transcript=0bp_to_NM_007213,uc004dmi.2_5end | ||
|cluster_id=chrX:48931650..48931681,- | |||
|coexpression_cluster_id=C1142 | |coexpression_cluster_id=C1142 | ||
|description=CAGE_peak_1_at_PRAF2_5end | |description=CAGE_peak_1_at_PRAF2_5end | ||
|id=chrX:48931650..48931681,- | |id=chrX:48931650..48931681,- | ||
|ontology_enrichment_celltype=CL:0000055!5.24e-33!180;CL:0000183!1.35e-20!59;CL:0000680!7.52e-19!57;CL:0000056!7.52e-19!57;CL:0000355!7.52e-19!57;CL:0000187!1.12e-18!54;CL:0000192!2.86e-17!42;CL:0000514!2.86e-17!42;CL:0000393!1.70e-16!60;CL:0000211!1.70e-16!60;CL:0000359!2.91e-14!32;CL:0000222!3.55e-14!119;CL:0000057!2.18e-11!75;CL:0000220!3.30e-10!246;CL:0002321!3.76e-10!248 | |ontology_enrichment_celltype=CL:0000055!5.24e-33!180;CL:0000183!1.35e-20!59;CL:0000680!7.52e-19!57;CL:0000056!7.52e-19!57;CL:0000355!7.52e-19!57;CL:0000187!1.12e-18!54;CL:0000192!2.86e-17!42;CL:0000514!2.86e-17!42;CL:0000393!1.70e-16!60;CL:0000211!1.70e-16!60;CL:0000359!2.91e-14!32;CL:0000222!3.55e-14!119;CL:0000057!2.18e-11!75;CL:0000220!3.30e-10!246;CL:0002321!3.76e-10!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.62e-13;32!CL:0000192;8.32e-13;43!CL:0000187;2.93e-10;55!CL:0000393;5.19e-09;61!CL:0000211;5.19e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.58e-19,58;CL:0000056,6.58e-19,58;CL:0000355,6.58e-19,58;CL:0000187,9.96e-19,55;CL:0000192,2.72e-17,43;CL:0000514,2.72e-17,43;CL:0000393,1.42e-16,61;CL:0000211,1.42e-16,61;CL:0000359,2.90e-14,32;CL:0000222,3.46e-14,121;CL:0000057,1.49e-11,76;CL:0002321,2.86e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;8.32e-13;43!CL:0000355;2.55e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;9.10e-10;33!UBERON:0004571;9.10e-10;33!UBERON:0001637;3.32e-09;42!UBERON:0003509;3.32e-09;42!UBERON:0004572;3.32e-09;42!UBERON:0001893;2.42e-07;34!UBERON:0001869;2.75e-07;32!UBERON:0007500;3.73e-07;56!UBERON:0001981;3.73e-07;56!UBERON:0004537;3.73e-07;56!UBERON:0002791;4.81e-07;32!UBERON:0003528;4.99e-07;34!UBERON:0002020;4.99e-07;34!UBERON:0002619;6.32e-07;22!UBERON:0000073;7.25e-07;53!UBERON:0002616;7.25e-07;53!UBERON:0002780;7.81e-07;41!UBERON:0001890;7.81e-07;41 | |||
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| ||
|short_description=p1@PRAF2 | |short_description=p1@PRAF2 | ||
}} | }} |
Latest revision as of 21:00, 15 September 2015
Short description: | p1@PRAF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRAF2_5end |
Coexpression cluster: | C1142_Mesenchymal_Fibroblast_Pericytes_Smooth_Renal_Hepatic_Hair |
Association with transcript: | 0bp_to_NM_007213, uc004dmi.2_5end |
EntrezGene: | PRAF2 |
HGNC: | 28911 |
UniProt: | O60831 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.58e-19 | 58 |
myoblast | 6.58e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.58e-19 | 58 |
muscle cell | 9.96e-19 | 55 |
smooth muscle cell | 2.72e-17 | 43 |
smooth muscle myoblast | 2.72e-17 | 43 |
electrically responsive cell | 1.42e-16 | 61 |
electrically active cell | 1.42e-16 | 61 |
vascular associated smooth muscle cell | 2.90e-14 | 32 |
mesodermal cell | 3.46e-14 | 121 |
fibroblast | 1.49e-11 | 76 |
embryonic cell | 2.86e-10 | 250 |