FFCP PHASE1:Hg19::chrX:48911090..48911113,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:48911090..48911113,+
|short_description=p2@CCDC120
|description=CAGE_peak_2_at_CCDC120_5end
|association_with_transcript=0bp_to_uc010nik.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90060 | |EntrezGene=90060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28910 | |HGNC=28910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010nik.2_5end | |||
|cluster_id=chrX:48911090..48911113,+ | |||
|description=CAGE_peak_2_at_CCDC120_5end | |||
|id=chrX:48911090..48911113,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.15e-09!22;DOID:2994!1.15e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.44e-10;22!DOID:2994;2.44e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.44e-10,22;DOID:2994,3.44e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.79e-12!90;UBERON:0005743!3.86e-12!86;UBERON:0000073!4.96e-12!94;UBERON:0001016!4.96e-12!94;UBERON:0001017!2.10e-11!82;UBERON:0003075!6.02e-11!86;UBERON:0007284!6.02e-11!86;UBERON:0001049!2.52e-10!57;UBERON:0005068!2.52e-10!57;UBERON:0006241!2.52e-10!57;UBERON:0007135!2.52e-10!57;UBERON:0002616!6.87e-10!59;UBERON:0003056!5.43e-09!61;UBERON:0000955!4.08e-08!69;UBERON:0006238!4.08e-08!69;UBERON:0001869!6.70e-08!32;UBERON:0001893!1.23e-07!34;UBERON:0002780!1.30e-07!41;UBERON:0001890!1.30e-07!41;UBERON:0006240!1.30e-07!41;UBERON:0000956!1.59e-07!25;UBERON:0000203!1.59e-07!25;UBERON:0002791!1.81e-07!33;UBERON:0002020!1.89e-07!34;UBERON:0003528!1.89e-07!34;UBERON:0003080!2.84e-07!42;UBERON:0002619!9.14e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.15e-09;49!UBERON:0000956;8.00e-08;25!UBERON:0000203;8.00e-08;25!UBERON:0001893;1.00e-07;34!UBERON:0001869;1.02e-07;32!UBERON:0002791;2.28e-07;32!UBERON:0003528;2.54e-07;34!UBERON:0002020;2.54e-07;34!UBERON:0000073;2.96e-07;53!UBERON:0002616;2.96e-07;53!UBERON:0002619;5.00e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.91e-13,86;UBERON:0001016,5.13e-13,89;UBERON:0001017,9.36e-13,81;UBERON:0003075,8.70e-12,82;UBERON:0007284,8.70e-12,82;UBERON:0001049,1.43e-11,56;UBERON:0005068,1.43e-11,56;UBERON:0006241,1.43e-11,56;UBERON:0007135,1.43e-11,56;UBERON:0000073,2.63e-11,53;UBERON:0002616,2.63e-11,53;UBERON:0003056,1.08e-09,61;UBERON:0000955,3.61e-09,68;UBERON:0006238,3.61e-09,68;UBERON:0001869,9.89e-09,32;UBERON:0001893,1.97e-08,34;UBERON:0002780,2.79e-08,41;UBERON:0001890,2.79e-08,41;UBERON:0003080,2.79e-08,41;UBERON:0006240,2.79e-08,41;UBERON:0002791,2.94e-08,32;UBERON:0003528,3.17e-08,34;UBERON:0002020,3.17e-08,34;UBERON:0000956,3.86e-08,25;UBERON:0000203,3.86e-08,25;UBERON:0010371,4.58e-08,104;UBERON:0002619,2.49e-07,22 | |||
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| ||
|short_description=p2@CCDC120 | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p2@CCDC120 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC120_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010nik.2_5end |
EntrezGene: | CCDC120 |
HGNC: | 28910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.91e-13 | 86 |
nervous system | 5.13e-13 | 89 |
central nervous system | 9.36e-13 | 81 |
neural plate | 8.70e-12 | 82 |
presumptive neural plate | 8.70e-12 | 82 |
neural tube | 1.43e-11 | 56 |
neural rod | 1.43e-11 | 56 |
future spinal cord | 1.43e-11 | 56 |
neural keel | 1.43e-11 | 56 |
regional part of nervous system | 2.63e-11 | 53 |
regional part of brain | 2.63e-11 | 53 |
pre-chordal neural plate | 1.08e-09 | 61 |
brain | 3.61e-09 | 68 |
future brain | 3.61e-09 | 68 |
cerebral hemisphere | 9.89e-09 | 32 |
telencephalon | 1.97e-08 | 34 |
regional part of forebrain | 2.79e-08 | 41 |
forebrain | 2.79e-08 | 41 |
anterior neural tube | 2.79e-08 | 41 |
future forebrain | 2.79e-08 | 41 |
regional part of telencephalon | 2.94e-08 | 32 |
brain grey matter | 3.17e-08 | 34 |
gray matter | 3.17e-08 | 34 |
cerebral cortex | 3.86e-08 | 25 |
pallium | 3.86e-08 | 25 |
ecto-epithelium | 4.58e-08 | 104 |
regional part of cerebral cortex | 2.49e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.44e-10 | 22 |
germ cell cancer | 3.44e-10 | 22 |