FFCP PHASE1:Hg19::chr22:50965346..50965358,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10604 | |||
|TSSclassifier=strong | |||
|UniProt=C9JBU1,O43819 | |||
|association_with_transcript=-478bp_to_ENST00000423348,ENST00000543927,NM_001169109_5end | |||
|cluster_id=chr22:50965346..50965358,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_SCO2_5end | |||
|id=chr22:50965346..50965358,- | |||
|ontology_enrichment_celltype=CL:0002057!5.07e-53!42;CL:0000860!8.52e-49!45;CL:0000766!2.18e-48!76;CL:0002009!2.35e-41!65;CL:0000763!2.42e-39!112;CL:0000049!2.42e-39!112;CL:0000738!2.67e-39!140;CL:0000557!4.68e-39!71;CL:0002194!7.65e-38!63;CL:0000576!7.65e-38!63;CL:0000040!7.65e-38!63;CL:0000559!7.65e-38!63;CL:0000839!4.85e-35!70;CL:0000988!1.08e-31!182;CL:0000037!2.43e-30!172;CL:0000566!2.43e-30!172;CL:0002032!3.02e-28!165;CL:0000837!3.02e-28!165;CL:0002087!4.78e-25!119;CL:0002031!9.39e-24!124;CL:0002393!1.18e-20!9;CL:0002397!1.18e-20!9;CL:0000094!1.90e-15!8;CL:0000081!4.26e-14!11;CL:0000080!2.19e-12!6;CL:0000453!5.31e-12!5;CL:0000134!4.89e-09!358;CL:0000990!8.32e-09!8;CL:0000775!8.77e-09!3;CL:0002320!1.38e-08!365;CL:0000875!1.74e-08!3;CL:0002396!1.74e-08!3;CL:0000451!4.67e-07!10;CL:0000219!5.11e-07!390;CL:0000842!5.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.92e-37;8!CL:0000775;1.84e-36;3!CL:0000081;2.93e-27;11!CL:0000771;3.44e-25;2!CL:0000875;1.88e-16;3!CL:0002396;1.88e-16;3!CL:0000766;3.89e-09;69!CL:0001014;4.04e-07;2!CL:0001016;4.04e-07;2!CL:0000576;5.05e-07;48!CL:0000763;7.03e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.93e-37,8;CL:0000775,1.85e-36,3;CL:0000081,2.94e-27,11;CL:0000771,3.44e-25,2;CL:0000766,1.27e-21,72;CL:0000875,1.27e-16,3;CL:0002396,1.27e-16,3;CL:0000763,1.57e-16,108;CL:0000049,1.57e-16,108;CL:0000860,5.99e-13,42;CL:0002057,5.99e-13,42;CL:0000738,8.52e-13,136;CL:0002393,3.16e-12,9;CL:0002397,3.16e-12,9;CL:0000473,2.95e-11,48;CL:0000234,2.95e-11,48;CL:0002009,3.71e-11,61;CL:0002032,1.52e-10,161;CL:0000837,1.52e-10,161;CL:0000557,4.26e-10,67;CL:0000037,4.93e-10,168;CL:0000988,1.96e-09,177;CL:0002194,7.00e-09,59;CL:0000576,7.00e-09,59;CL:0000040,7.00e-09,59;CL:0000559,7.00e-09,59;CL:0000839,6.92e-08,66;CL:0001014,3.48e-07,2;CL:0001016,3.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.87e-10;42!CL:0000049;8.33e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-54!102;UBERON:0003061!1.84e-54!102;UBERON:0002193!2.99e-48!112;UBERON:0002371!2.04e-33!80;UBERON:0001474!2.59e-30!86;UBERON:0000178!2.62e-27!15;UBERON:0000179!2.62e-27!15;UBERON:0000463!2.62e-27!15;UBERON:0002405!3.21e-25!115;UBERON:0004765!3.53e-24!101;UBERON:0001434!3.53e-24!101;UBERON:0003081!8.65e-19!216;UBERON:0002204!6.44e-13!167;UBERON:0002384!5.65e-08!375;UBERON:0000926!8.67e-07!448;UBERON:0004120!8.67e-07!448;UBERON:0006603!8.67e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.52e-07;15!UBERON:0000179;1.52e-07;15!UBERON:0000463;1.52e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.83e-13,98;UBERON:0003061,9.83e-13,98;UBERON:0002193,1.97e-11,108;UBERON:0002371,8.14e-09,76;UBERON:0001474,4.09e-08,82;UBERON:0000178,1.64e-07,15;UBERON:0000179,1.64e-07,15;UBERON:0000463,1.64e-07,15;UBERON:0004765,2.53e-07,90;UBERON:0002405,4.63e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0.581592955118259,0,0.727752183563449,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,1.35426486594342,0.752969358170419,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,1.64925650093358,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.868755378820466,1.21079900526674,0.368277635987565,0.316462387440884,0.845021145247767,1.06302149982522,0.419317291016752,0.561643155732475,1.20141514273205,0.32145117339416,1.42506371870624,0.79566670879636,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2351053592077,11.966458368161,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SCO2 | |||
}} |
Latest revision as of 20:51, 15 September 2015
Short description: | p11@SCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SCO2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -478bp_to_ENST00000423348, ENST00000543927, NM_001169109_5end |
EntrezGene: | SCO2 |
HGNC: | 10604 |
UniProt: | C9JBU1O43819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.93e-37 | 8 |
neutrophil | 1.85e-36 | 3 |
blood cell | 2.94e-27 | 11 |
eosinophil | 3.44e-25 | 2 |
myeloid leukocyte | 1.27e-21 | 72 |
non-classical monocyte | 1.27e-16 | 3 |
CD14-low, CD16-positive monocyte | 1.27e-16 | 3 |
myeloid cell | 1.57e-16 | 108 |
common myeloid progenitor | 1.57e-16 | 108 |
classical monocyte | 5.99e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.99e-13 | 42 |
leukocyte | 8.52e-13 | 136 |
intermediate monocyte | 3.16e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.16e-12 | 9 |
defensive cell | 2.95e-11 | 48 |
phagocyte | 2.95e-11 | 48 |
macrophage dendritic cell progenitor | 3.71e-11 | 61 |
hematopoietic oligopotent progenitor cell | 1.52e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-10 | 161 |
granulocyte monocyte progenitor cell | 4.26e-10 | 67 |
hematopoietic stem cell | 4.93e-10 | 168 |
hematopoietic cell | 1.96e-09 | 177 |
monopoietic cell | 7.00e-09 | 59 |
monocyte | 7.00e-09 | 59 |
monoblast | 7.00e-09 | 59 |
promonocyte | 7.00e-09 | 59 |
myeloid lineage restricted progenitor cell | 6.92e-08 | 66 |
CD1a-positive Langerhans cell | 3.48e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.83e-13 | 98 |
blood island | 9.83e-13 | 98 |
hemolymphoid system | 1.97e-11 | 108 |
bone marrow | 8.14e-09 | 76 |
bone element | 4.09e-08 | 82 |
blood | 1.64e-07 | 15 |
haemolymphatic fluid | 1.64e-07 | 15 |
organism substance | 1.64e-07 | 15 |
skeletal element | 2.53e-07 | 90 |
immune system | 4.63e-07 | 93 |