FFCP PHASE1:Hg19::chr9:131534132..131534143,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131534132..131534143,- to FFCP PHASE1:Hg19::chr9:131534132..131534143,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10444 | |EntrezGene=10444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30960 | |HGNC=30960 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z7L7 | |UniProt=Q7Z7L7 | ||
|association_with_transcript=28bp_to_ENST00000291900_5end | |||
|cluster_id=chr9:131534132..131534143,- | |||
|description=CAGE_peak_3_at_ZER1_5end | |||
|id=chr9:131534132..131534143,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-29!115;UBERON:0001049!1.34e-11!57;UBERON:0005068!1.34e-11!57;UBERON:0006241!1.34e-11!57;UBERON:0007135!1.34e-11!57;UBERON:0002780!1.05e-10!41;UBERON:0001890!1.05e-10!41;UBERON:0006240!1.05e-10!41;UBERON:0002616!1.14e-10!59;UBERON:0003080!1.92e-10!42;UBERON:0002619!7.85e-10!22;UBERON:0003075!1.14e-09!86;UBERON:0007284!1.14e-09!86;UBERON:0001893!1.86e-09!34;UBERON:0002791!6.14e-09!33;UBERON:0001869!6.82e-09!32;UBERON:0003056!1.20e-08!61;UBERON:0001950!1.24e-08!20;UBERON:0002020!1.50e-08!34;UBERON:0003528!1.50e-08!34;UBERON:0002346!1.54e-08!90;UBERON:0000955!2.41e-08!69;UBERON:0006238!2.41e-08!69;UBERON:0000956!1.22e-07!25;UBERON:0000203!1.22e-07!25;UBERON:0001017!4.63e-07!82;UBERON:0005743!5.32e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.47e-11;22!UBERON:0001950;1.02e-09;20!UBERON:0001869;2.32e-09;32!UBERON:0001893;4.10e-09;34!UBERON:0002791;4.54e-09;32!UBERON:0002780;6.17e-09;41!UBERON:0001890;6.17e-09;41!UBERON:0000956;8.08e-09;25!UBERON:0000203;8.08e-09;25!UBERON:0003528;2.75e-08;34!UBERON:0002020;2.75e-08;34!UBERON:0000073;1.83e-07;53!UBERON:0002616;1.83e-07;53!UBERON:0007023;5.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.74e-31,114;UBERON:0001049,2.88e-13,56;UBERON:0005068,2.88e-13,56;UBERON:0006241,2.88e-13,56;UBERON:0007135,2.88e-13,56;UBERON:0002780,4.07e-13,41;UBERON:0001890,4.07e-13,41;UBERON:0003080,4.07e-13,41;UBERON:0006240,4.07e-13,41;UBERON:0000073,9.25e-13,53;UBERON:0002616,9.25e-13,53;UBERON:0001893,8.46e-12,34;UBERON:0002619,8.50e-12,22;UBERON:0001869,4.19e-11,32;UBERON:0002791,8.46e-11,32;UBERON:0003528,2.11e-10,34;UBERON:0002020,2.11e-10,34;UBERON:0001950,2.50e-10,20;UBERON:0003075,6.55e-10,82;UBERON:0007284,6.55e-10,82;UBERON:0000955,1.65e-09,68;UBERON:0006238,1.65e-09,68;UBERON:0000956,2.44e-09,25;UBERON:0000203,2.44e-09,25;UBERON:0003056,2.78e-09,61;UBERON:0002346,1.27e-08,86;UBERON:0001017,1.91e-08,81;UBERON:0010314,1.39e-07,132;UBERON:0010371,3.32e-07,104 | |||
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| ||
|short_description=p3@ZER1 | |||
}} | }} |
Latest revision as of 20:45, 15 September 2015
Short description: | p3@ZER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000291900_5end |
EntrezGene: | ZER1 |
HGNC: | 30960 |
UniProt: | Q7Z7L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.74e-31 | 114 |
neural tube | 2.88e-13 | 56 |
neural rod | 2.88e-13 | 56 |
future spinal cord | 2.88e-13 | 56 |
neural keel | 2.88e-13 | 56 |
regional part of forebrain | 4.07e-13 | 41 |
forebrain | 4.07e-13 | 41 |
anterior neural tube | 4.07e-13 | 41 |
future forebrain | 4.07e-13 | 41 |
regional part of nervous system | 9.25e-13 | 53 |
regional part of brain | 9.25e-13 | 53 |
telencephalon | 8.46e-12 | 34 |
regional part of cerebral cortex | 8.50e-12 | 22 |
cerebral hemisphere | 4.19e-11 | 32 |
regional part of telencephalon | 8.46e-11 | 32 |
brain grey matter | 2.11e-10 | 34 |
gray matter | 2.11e-10 | 34 |
neocortex | 2.50e-10 | 20 |
neural plate | 6.55e-10 | 82 |
presumptive neural plate | 6.55e-10 | 82 |
brain | 1.65e-09 | 68 |
future brain | 1.65e-09 | 68 |
cerebral cortex | 2.44e-09 | 25 |
pallium | 2.44e-09 | 25 |
pre-chordal neural plate | 2.78e-09 | 61 |
neurectoderm | 1.27e-08 | 86 |
central nervous system | 1.91e-08 | 81 |
structure with developmental contribution from neural crest | 1.39e-07 | 132 |
ecto-epithelium | 3.32e-07 | 104 |