FFCP PHASE1:Hg19::chr12:102455905..102455915,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51019 | |EntrezGene=51019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24256 | |HGNC=24256 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3C0 | |UniProt=Q9Y3C0 | ||
|association_with_transcript=-3bp_to_ENST00000240079_5end | |association_with_transcript=-3bp_to_ENST00000240079_5end | ||
|cluster_id=chr12:102455905..102455915,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_CCDC53_5end | |description=CAGE_peak_5_at_CCDC53_5end | ||
|id=chr12:102455905..102455915,- | |id=chr12:102455905..102455915,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.30e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.70e-40;1!DOID:1357;2.70e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.70e-40;1!UBERON:0001825;2.70e-40;1!UBERON:0003566;6.30e-21;2!UBERON:0001777;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003891;3.60e-11;4!UBERON:0000964;3.60e-11;4!UBERON:0010409;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0000473,6.64e-21,8;UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p5@CCDC53 | |short_description=p5@CCDC53 | ||
}} | }} |
Latest revision as of 20:41, 15 September 2015
Short description: | p5@CCDC53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC53_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -3bp_to_ENST00000240079_5end |
EntrezGene: | CCDC53 |
HGNC: | 24256 |
UniProt: | Q9Y3C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
testis | 6.64e-21 | 8 |
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |