FFCP PHASE1:Hg19::chr12:91398742..91398768,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1833 | |EntrezGene=1833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3053 | |HGNC=3053 | ||
|TSSclassifier=strong | |||
|UniProt=Q99645,F8VSI4 | |UniProt=Q99645,F8VSI4 | ||
|association_with_transcript=34bp_to_ENST00000261172,ENST00000551767,NM_004950,uc001tbk.2_5end | |association_with_transcript=34bp_to_ENST00000261172,ENST00000551767,NM_004950,uc001tbk.2_5end | ||
|cluster_id=chr12:91398742..91398768,- | |||
|coexpression_cluster_id=C216 | |coexpression_cluster_id=C216 | ||
|description=CAGE_peak_1_at_EPYC_5end | |description=CAGE_peak_1_at_EPYC_5end | ||
|id=chr12:91398742..91398768,- | |id=chr12:91398742..91398768,- | ||
|ontology_enrichment_celltype=CL:0000062!3.19e-15!11;CL:0000375!3.19e-15!11;CL:0000335!3.19e-15!11;CL:0000035!7.01e-08!20 | |ontology_enrichment_celltype=CL:0000062!3.19e-15!11;CL:0000375!3.19e-15!11;CL:0000335!3.19e-15!11;CL:0000035!7.01e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.46e-21;9!CL:0002541;4.77e-11;3!CL:0000153;4.29e-08;9!CL:0000447;4.29e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.55e-17,11;CL:0000375,2.55e-17,11;CL:0000335,2.55e-17,11;CL:0002541,4.90e-11,3;CL:0000153,4.23e-08,9;CL:0000447,4.23e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000335;2.59e-17;11!UBERON:0003124;4.18e-09;1!UBERON:0000358;1.37e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;6.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003127!3.14e-08!2 | |ontology_enrichment_uberon=UBERON:0003127!3.14e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.77e-11;3!UBERON:0000920;4.77e-11;3!UBERON:0007029;1.91e-08;1!UBERON:0000478;1.37e-07;24!UBERON:0005631;3.31e-07;10!UBERON:0000158;3.31e-07;10!UBERON:0000945;5.91e-07;5!UBERON:0010039;5.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.90e-11,3;UBERON:0003124,2.31e-10,7;UBERON:0005631,9.16e-09,14;UBERON:0000158,9.16e-09,14;UBERON:0007029,1.91e-08,1;UBERON:0000478,1.35e-07,24 | |||
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| ||
|short_description=p1@EPYC | |short_description=p1@EPYC | ||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p1@EPYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPYC_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 34bp_to_ENST00000261172, ENST00000551767, NM_004950, uc001tbk.2_5end |
EntrezGene: | EPYC |
HGNC: | 3053 |
UniProt: | Q99645F8VSI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.55e-17 | 11 |
osteoprogenitor cell | 2.55e-17 | 11 |
mesenchyme condensation cell | 2.55e-17 | 11 |
chorionic membrane mesenchymal stem cell | 4.90e-11 | 3 |
GAG secreting cell | 4.23e-08 | 9 |
carbohydrate secreting cell | 4.23e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.90e-11 | 3 |
chorion | 2.31e-10 | 7 |
extraembryonic membrane | 9.16e-09 | 14 |
membranous layer | 9.16e-09 | 14 |
surface | 1.91e-08 | 1 |
extraembryonic structure | 1.35e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.65e-09 | 1 |