FFCP PHASE1:Hg19::chr14:71108460..71108508,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:71108460..71108508,+ to FFCP PHASE1:Hg19::chr14:71108460..71108508,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23508 | |EntrezGene=23508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20267 | |HGNC=20267 | ||
|TSSclassifier=strong | |||
|UniProt=Q92623 | |UniProt=Q92623 | ||
|association_with_transcript=0bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end | |||
|cluster_id=chr14:71108460..71108508,+ | |||
|description=CAGE_peak_2_at_TTC9_5end | |||
|id=chr14:71108460..71108508,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.66e-10!24;CL:0000826!1.66e-10!24;CL:0000542!3.81e-09!53;CL:0000051!3.81e-09!53;CL:0000838!4.42e-09!52;CL:0000236!5.93e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.39e-13;24!CL:1000507;7.54e-10;10!CL:1000494;7.54e-10;10!CL:0000236;9.13e-09;13!CL:1000449;2.38e-08;15!CL:1000497;5.97e-07;17!CL:0002518;5.97e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.22e-13,24;CL:0000826,4.22e-13,24;CL:1000507,4.43e-10,10;CL:1000494,4.43e-10,10;CL:0000236,3.35e-09,14;CL:1000449,1.49e-08,15;CL:0000838,4.19e-08,52;CL:0000542,8.42e-08,53;CL:0000051,8.42e-08,53;CL:1000497,3.99e-07,17;CL:0002518,3.99e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.77e-24!86;UBERON:0000073!7.03e-24!94;UBERON:0001016!7.03e-24!94;UBERON:0001017!1.08e-22!82;UBERON:0001049!1.60e-21!57;UBERON:0005068!1.60e-21!57;UBERON:0006241!1.60e-21!57;UBERON:0007135!1.60e-21!57;UBERON:0000955!6.57e-19!69;UBERON:0006238!6.57e-19!69;UBERON:0002780!1.97e-18!41;UBERON:0001890!1.97e-18!41;UBERON:0006240!1.97e-18!41;UBERON:0002616!3.12e-18!59;UBERON:0002020!6.06e-18!34;UBERON:0003528!6.06e-18!34;UBERON:0001893!1.19e-17!34;UBERON:0003080!1.84e-17!42;UBERON:0001869!2.17e-17!32;UBERON:0007023!4.61e-17!115;UBERON:0002791!4.97e-17!33;UBERON:0003075!1.56e-14!86;UBERON:0007284!1.56e-14!86;UBERON:0000956!5.58e-14!25;UBERON:0000203!5.58e-14!25;UBERON:0002619!1.21e-12!22;UBERON:0002346!1.41e-12!90;UBERON:0001950!3.86e-12!20;UBERON:0003056!2.04e-11!61;UBERON:0004121!2.48e-08!169;UBERON:0000153!4.01e-08!129;UBERON:0007811!4.01e-08!129;UBERON:0000064!5.43e-08!219;UBERON:0000033!5.51e-08!123;UBERON:0000924!2.11e-07!173;UBERON:0006601!2.11e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.04e-19;32!UBERON:0003528;8.61e-19;34!UBERON:0002020;8.61e-19;34!UBERON:0001893;1.34e-18;34!UBERON:0002791;1.50e-18;32!UBERON:0000956;2.11e-17;25!UBERON:0000203;2.11e-17;25!UBERON:0002780;4.55e-16;41!UBERON:0001890;4.55e-16;41!UBERON:0001950;1.76e-15;20!UBERON:0002619;2.81e-15;22!UBERON:0000073;2.58e-14;53!UBERON:0002616;2.58e-14;53!UBERON:0000955;8.45e-12;68!UBERON:0001017;1.39e-10;75!UBERON:0004211;7.54e-10;10!UBERON:0009773;7.54e-10;10!UBERON:0001231;7.54e-10;10!UBERON:0004810;7.54e-10;10!UBERON:0001016;1.81e-08;83!UBERON:0006555;2.38e-08;15!UBERON:0004819;2.38e-08;15!UBERON:0001285;2.38e-08;15!UBERON:0007684;2.38e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.40e-26,81;UBERON:0001049,9.98e-26,56;UBERON:0005068,9.98e-26,56;UBERON:0006241,9.98e-26,56;UBERON:0007135,9.98e-26,56;UBERON:0000073,3.47e-25,53;UBERON:0002616,3.47e-25,53;UBERON:0001016,5.85e-24,89;UBERON:0000955,1.59e-22,68;UBERON:0006238,1.59e-22,68;UBERON:0001869,6.14e-22,32;UBERON:0003528,1.04e-21,34;UBERON:0002020,1.04e-21,34;UBERON:0001893,2.70e-21,34;UBERON:0002780,2.94e-21,41;UBERON:0001890,2.94e-21,41;UBERON:0003080,2.94e-21,41;UBERON:0006240,2.94e-21,41;UBERON:0002791,5.09e-20,32;UBERON:0000956,1.06e-17,25;UBERON:0000203,1.06e-17,25;UBERON:0003075,1.87e-17,82;UBERON:0007284,1.87e-17,82;UBERON:0002346,6.75e-16,86;UBERON:0001950,7.67e-16,20;UBERON:0002619,1.40e-15,22;UBERON:0003056,1.82e-15,61;UBERON:0007023,1.16e-12,114;UBERON:0010371,2.44e-11,104;UBERON:0004810,4.43e-10,10;UBERON:0011216,2.46e-09,223;UBERON:0010314,4.30e-09,132;UBERON:0006555,5.87e-09,16;UBERON:0004819,5.87e-09,16;UBERON:0004121,1.05e-08,171;UBERON:0000924,1.05e-08,171;UBERON:0006601,1.05e-08,171;UBERON:0004211,1.49e-08,15;UBERON:0009773,1.49e-08,15;UBERON:0001231,1.49e-08,15;UBERON:0001285,1.49e-08,15;UBERON:0007684,1.49e-08,15;UBERON:0004208,1.49e-08,15;UBERON:0000025,2.84e-07,192 | |||
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| ||
|short_description=p2@TTC9 | |||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p2@TTC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256367, NM_015351, uc001xmi.2_5end |
EntrezGene: | TTC9 |
HGNC: | 20267 |
UniProt: | Q92623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.22e-13 | 24 |
pro-B cell | 4.22e-13 | 24 |
kidney tubule cell | 4.43e-10 | 10 |
nephron tubule epithelial cell | 4.43e-10 | 10 |
B cell | 3.35e-09 | 14 |
epithelial cell of nephron | 1.49e-08 | 15 |
lymphoid lineage restricted progenitor cell | 4.19e-08 | 52 |
lymphocyte | 8.42e-08 | 53 |
common lymphoid progenitor | 8.42e-08 | 53 |
kidney cell | 3.99e-07 | 17 |
kidney epithelial cell | 3.99e-07 | 17 |