FFCP PHASE1:Hg19::chr1:109400845..109400854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254268 | |EntrezGene=254268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28398 | |HGNC=28398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474186,uc001dwb.2_5end | |association_with_transcript=0bp_to_ENST00000474186,uc001dwb.2_5end | ||
|cluster_id=chr1:109400845..109400854,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_5_at_AKNAD1_5end | |description=CAGE_peak_5_at_AKNAD1_5end | ||
|id=chr1:109400845..109400854,- | |id=chr1:109400845..109400854,- | ||
|ontology_enrichment_celltype=CL:0000242!3.93e-22!2;CL:0000312!2.00e-09!5;CL:0000240!5.36e-08!6;CL:0000311!5.36e-08!6;CL:0000079!5.36e-08!6;CL:0000237!5.36e-08!6;CL:0000036!5.36e-08!6;CL:0000357!5.36e-08!6;CL:0000114!5.36e-08!6 | |ontology_enrichment_celltype=CL:0000242!3.93e-22!2;CL:0000312!2.00e-09!5;CL:0000240!5.36e-08!6;CL:0000311!5.36e-08!6;CL:0000079!5.36e-08!6;CL:0000237!5.36e-08!6;CL:0000036!5.36e-08!6;CL:0000357!5.36e-08!6;CL:0000114!5.36e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002319;2.06e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.57e-09,6;CL:0000031,1.57e-09,6;CL:0000404,1.57e-09,6;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0002319,2.14e-08,25;CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.79e-14!7;UBERON:0001882!1.63e-11!1;UBERON:0005403!1.63e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0002370!2.25e-11!4;UBERON:0005058!2.25e-11!4;UBERON:0009113!2.25e-11!4;UBERON:0003295!2.25e-11!4;UBERON:0005562!2.25e-11!4;UBERON:0001950!2.44e-08!20;UBERON:0001869!6.76e-08!32;UBERON:0003351!7.08e-08!6;UBERON:0002791!1.17e-07!33;UBERON:0002619!1.26e-07!22;UBERON:0002020!1.95e-07!34;UBERON:0003528!1.95e-07!34;UBERON:0001893!1.95e-07!34;UBERON:0000956!9.21e-07!25;UBERON:0000203!9.21e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;3.26e-11;5!UBERON:0002021;3.26e-11;5!UBERON:0001950;1.77e-10;20!UBERON:0002619;1.17e-09;22!UBERON:0000956;1.15e-08;25!UBERON:0000203;1.15e-08;25!UBERON:0001016;2.80e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.94e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0001950,1.69e-10,20;UBERON:0001017,2.17e-10,81;UBERON:0002619,1.12e-09,22;UBERON:0001016,1.88e-09,89;UBERON:0000956,1.11e-08,25;UBERON:0000203,1.11e-08,25;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68;UBERON:0002791,4.74e-07,32;UBERON:0001869,4.74e-07,32 | |||
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|short_description=p5@AKNAD1 | |short_description=p5@AKNAD1 | ||
}} | }} |
Latest revision as of 20:21, 15 September 2015
Short description: | p5@AKNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AKNAD1_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | 0bp_to_ENST00000474186, uc001dwb.2_5end |
EntrezGene: | AKNAD1 |
HGNC: | 28398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.57e-09 | 6 |
neuroblast | 1.57e-09 | 6 |
electrically signaling cell | 1.57e-09 | 6 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
neural cell | 2.14e-08 | 25 |
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.94e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
neocortex | 1.69e-10 | 20 |
central nervous system | 2.17e-10 | 81 |
regional part of cerebral cortex | 1.12e-09 | 22 |
nervous system | 1.88e-09 | 89 |
cerebral cortex | 1.11e-08 | 25 |
pallium | 1.11e-08 | 25 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
regional part of telencephalon | 4.74e-07 | 32 |
cerebral hemisphere | 4.74e-07 | 32 |