FFCP PHASE1:Hg19::chr12:102224752..102224763,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:102224752..102224763,-
|short_description=p3@GNPTAB
|description=CAGE_peak_3_at_GNPTAB_5end
|association_with_transcript=-36bp_to_ENST00000299314_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79158 | |EntrezGene=79158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29670 | |HGNC=29670 | ||
|TSSclassifier=strong | |||
|UniProt=Q3T906 | |UniProt=Q3T906 | ||
|association_with_transcript=-36bp_to_ENST00000299314_5end | |||
|cluster_id=chr12:102224752..102224763,- | |||
|description=CAGE_peak_3_at_GNPTAB_5end | |||
|id=chr12:102224752..102224763,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;5.20e-08;1!CL:0000557;5.20e-08;1!CL:0000895;5.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,6.63e-08,1;CL:0000895,6.63e-08,1;CL:0002436,6.63e-08,1;CL:0002427,6.63e-08,1;CL:0002428,6.63e-08,1;CL:0002429,6.63e-08,1;CL:0002433,6.63e-08,1;CL:0002431,6.63e-08,1;CL:0002432,6.63e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002427;5.20e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.14e-15!57;UBERON:0005068!3.14e-15!57;UBERON:0006241!3.14e-15!57;UBERON:0007135!3.14e-15!57;UBERON:0002346!6.20e-14!90;UBERON:0003075!1.63e-13!86;UBERON:0007284!1.63e-13!86;UBERON:0000073!5.10e-13!94;UBERON:0001016!5.10e-13!94;UBERON:0001017!1.46e-12!82;UBERON:0002780!2.05e-12!41;UBERON:0001890!2.05e-12!41;UBERON:0006240!2.05e-12!41;UBERON:0005743!3.35e-12!86;UBERON:0002616!6.99e-12!59;UBERON:0003080!8.79e-12!42;UBERON:0001893!1.44e-11!34;UBERON:0002020!1.74e-11!34;UBERON:0003528!1.74e-11!34;UBERON:0002791!3.77e-11!33;UBERON:0000955!5.41e-11!69;UBERON:0006238!5.41e-11!69;UBERON:0001869!1.49e-10!32;UBERON:0003056!2.39e-10!61;UBERON:0000153!2.64e-09!129;UBERON:0007811!2.64e-09!129;UBERON:0000924!4.37e-09!173;UBERON:0006601!4.37e-09!173;UBERON:0004121!1.11e-08!169;UBERON:0000033!3.43e-08!123;UBERON:0000956!7.08e-08!25;UBERON:0000203!7.08e-08!25;UBERON:0002619!4.09e-07!22;UBERON:0001950!4.16e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.84e-10;22!UBERON:0002791;3.15e-09;32!UBERON:0000956;6.58e-09;25!UBERON:0000203;6.58e-09;25!UBERON:0001869;1.04e-08;32!UBERON:0002780;3.95e-08;41!UBERON:0001890;3.95e-08;41!UBERON:0001874;5.20e-08;1!UBERON:0002426;5.20e-08;1!UBERON:0003831;5.20e-08;1!UBERON:0003898;5.20e-08;1!UBERON:0004830;5.20e-08;1!UBERON:0003830;5.20e-08;1!UBERON:0005175;5.20e-08;1!UBERON:0001774;5.20e-08;1!UBERON:0001103;5.20e-08;1!UBERON:0001950;5.92e-08;20!UBERON:0001893;4.30e-07;34!UBERON:0003528;4.96e-07;34!UBERON:0002020;4.96e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.20e-10,22;UBERON:0002791,2.93e-09,32;UBERON:0001869,2.93e-09,32;UBERON:0002780,4.03e-09,41;UBERON:0001890,4.03e-09,41;UBERON:0003080,4.03e-09,41;UBERON:0006240,4.03e-09,41;UBERON:0003056,4.47e-09,61;UBERON:0000956,7.10e-09,25;UBERON:0000203,7.10e-09,25;UBERON:0003528,1.11e-08,34;UBERON:0002020,1.11e-08,34;UBERON:0001893,1.11e-08,34;UBERON:0001874,2.71e-08,1;UBERON:0001016,2.86e-08,89;UBERON:0002426,3.11e-08,1;UBERON:0003831,3.11e-08,1;UBERON:0003898,3.11e-08,1;UBERON:0004830,3.11e-08,1;UBERON:0003830,3.11e-08,1;UBERON:0005175,3.11e-08,1;UBERON:0001774,3.11e-08,1;UBERON:0001103,3.11e-08,1;UBERON:0010084,3.11e-08,1;UBERON:0001049,4.01e-08,56;UBERON:0005068,4.01e-08,56;UBERON:0006241,4.01e-08,56;UBERON:0007135,4.01e-08,56;UBERON:0001950,7.28e-08,20;UBERON:0001017,7.59e-08,81;UBERON:0003075,9.07e-08,82;UBERON:0007284,9.07e-08,82;UBERON:0002370,2.00e-07,4;UBERON:0005058,2.00e-07,4;UBERON:0009113,2.00e-07,4;UBERON:0003295,2.00e-07,4;UBERON:0005562,2.00e-07,4;UBERON:0002346,2.53e-07,86;UBERON:0000073,7.62e-07,53;UBERON:0002616,7.62e-07,53 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0.85870796139317,0.136874425072884,0.251085279189606,0.152826811495903,0.328402357799783,0,0,0,0,0,0,0,0.46480320348181,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,1.7703879310245,0.393010762749165,0.822405995998037,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.512365278902701,0.390178042679635,0,0.276350017785848,0.289803085735052,0.444859689486181,0.802622484269139,0,0,1.14966148080576,1.03088233644789,0,0,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,1.30341963494519,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.775250277507987,0.35576626268671,0,0,0,0.488124115096339,0,0,0.267899184852239,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.100528972411631,0.277765335475589,0.325808305310325,1.03993478527958,0,0.34779121492523,0,0,0.462985512576611,0,0,0,0,0.234004265139238,0.594524649154913,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0.517086863031111,0,0.845302752556,1.06375246633948,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,1.17261385734044,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0.348631135379878,0.241718899183244,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.290033387828457,0.255679882248303,0.267096106940212,0,0.384380134730212,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.949138274156178,0,0,0,0,0,0,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0.577076851905779,0.284567373393656,0.478278818186467,0.997896857164083,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,1.57768678274367,0,0,0,0,0.614321404198464,0,1.1253553312841,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.537063524026827,0,0.197286811273867,0,0,0,0.463840490809256,3.99227596002388,0,0.262379999988587,0,0.227586896570999,0.762760950878299,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0.964771509003264,0,0.663475559587348,0.886642856860642,0.219385397153973,0.32681539055697,0.139423744278603,0.230850775511391,0.227884111694002,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0.784901281975124,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0.141353071433941,0.432777279484182,1.99052386215701,0.0884575645033392,1.22206028986725,0,0,0,0.741412462787447,1.60515529459758,0.702793337176017,0,0,0,0.394584402849391,0,1.22429104652196,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0.435296032902013,0,0.171986032471617,0.290268993867255,0.292357268344742,0.410577285266046,0,0.264768380074501,0.225980740780532,0.274083849293502,0,0.379864775735272,0.195551382734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| ||
|short_description=p3@GNPTAB | |||
}} | }} |
Latest revision as of 19:45, 15 September 2015
Short description: | p3@GNPTAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNPTAB_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000299314_5end |
EntrezGene: | GNPTAB |
HGNC: | 29670 |
UniProt: | Q3T906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 6.63e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.63e-08 | 1 |
mature CD4 single-positive thymocyte | 6.63e-08 | 1 |
resting double-positive thymocyte | 6.63e-08 | 1 |
double-positive blast | 6.63e-08 | 1 |
CD69-positive double-positive thymocyte | 6.63e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.63e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.63e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.63e-08 | 1 |