FFCP PHASE1:Hg19::chr16:2518541..2518589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729652 | |EntrezGene=729652 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-327bp_to_AL834536_5end | |||
|cluster_id=chr16:2518541..2518589,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_1_at_LOC729652_5end | |||
|id=chr16:2518541..2518589,- | |||
|ontology_enrichment_celltype=CL:0002150!1.99e-08!3;CL:0000861!1.99e-08!3;CL:0000242!9.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.98e-41;2!CL:0000242;3.98e-41;2!CL:0000312;3.95e-17;5!CL:0000240;1.90e-14;6!CL:0000311;1.90e-14;6!CL:0000079;1.90e-14;6!CL:0000237;1.90e-14;6!CL:0000095;3.74e-10;17!CL:0000362;5.93e-10;9!CL:0002328;6.56e-08;3!CL:0002319;2.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.99e-41,2;CL:0000312,3.95e-17,5;CL:0000240,1.90e-14,6;CL:0000311,1.90e-14,6;CL:0000079,1.90e-14,6;CL:0000237,1.90e-14,6;CL:0000036,1.90e-14,6;CL:0000357,1.90e-14,6;CL:0000114,1.90e-14,6;CL:0000095,3.68e-10,17;CL:0000123,3.68e-10,17;CL:0000362,5.93e-10,9;CL:0002328,5.54e-08,3;CL:0000333,8.74e-08,41;CL:0002319,2.54e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-14;6!CL:0000114;1.90e-14;6!UBERON:0003056;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.15e-08!106;DOID:0050687!3.45e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.86e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.07e-09;10!UBERON:0004815;6.56e-08;3!UBERON:0002031;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.80e-09,10;UBERON:0000358,6.80e-09,10;UBERON:0000307,6.80e-09,10;UBERON:0000091,6.80e-09,10;UBERON:0000087,6.80e-09,10;UBERON:0007010,6.80e-09,10;UBERON:0007806,6.80e-09,10;UBERON:0008780,6.80e-09,10;UBERON:0005728,6.80e-09,10;UBERON:0004815,5.54e-08,3;UBERON:0002031,5.54e-08,3 | |||
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| ||
|short_description=p1@LOC729652 | |||
}} | }} |
Latest revision as of 19:44, 15 September 2015
Short description: | p1@LOC729652 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC729652_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -327bp_to_AL834536_5end |
EntrezGene: | LOC729652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.99e-41 | 2 |
keratinocyte | 3.95e-17 | 5 |
stratified squamous epithelial cell | 1.90e-14 | 6 |
keratin accumulating cell | 1.90e-14 | 6 |
stratified epithelial cell | 1.90e-14 | 6 |
keratinizing barrier epithelial cell | 1.90e-14 | 6 |
epithelial fate stem cell | 1.90e-14 | 6 |
stratified epithelial stem cell | 1.90e-14 | 6 |
surface ectodermal cell | 1.90e-14 | 6 |
neuron associated cell | 3.68e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.68e-10 | 17 |
epidermal cell | 5.93e-10 | 9 |
bronchial epithelial cell | 5.54e-08 | 3 |
migratory neural crest cell | 8.74e-08 | 41 |
neural cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.80e-09 | 10 |
blastocyst | 6.80e-09 | 10 |
blastula | 6.80e-09 | 10 |
bilaminar disc | 6.80e-09 | 10 |
inner cell mass | 6.80e-09 | 10 |
cleaving embryo | 6.80e-09 | 10 |
connecting stalk | 6.80e-09 | 10 |
inner cell mass derived epiblast | 6.80e-09 | 10 |
extraembryonic mesoderm | 6.80e-09 | 10 |
lower respiratory tract epithelium | 5.54e-08 | 3 |
epithelium of bronchus | 5.54e-08 | 3 |