FFCP PHASE1:Hg19::chr10:101825164..101825200,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2312 | |||
|TSSclassifier=strong | |||
|UniProt=B1AP58 | |||
|association_with_transcript=-13bp_to_ENST00000441382_5end | |||
|cluster_id=chr10:101825164..101825200,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_3_at_CPN1_5end | |||
|id=chr10:101825164..101825200,- | |||
|ontology_enrichment_celltype=CL:0000148!3.45e-51!10;CL:0000541!3.45e-51!10;CL:0000147!1.48e-36!14;CL:0000710!1.46e-25!20;CL:0002567!2.74e-20!3;CL:0000075!6.79e-19!27;CL:0002566!1.54e-15!1;CL:0002077!2.02e-15!33;CL:0000325!5.17e-13!39;CL:0000333!8.88e-12!41;CL:0000133!3.26e-08!59;CL:0000221!8.31e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.55e-70;10!CL:0000147;1.97e-50;14!CL:0002567;1.23e-38;3!CL:0000710;1.71e-35;20!CL:0000075;1.95e-26;27!CL:0002077;6.67e-20;34!CL:0000149;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.74e-70,10;CL:0000541,2.74e-70,10;CL:0000147,2.07e-50,14;CL:0002567,1.23e-38,3;CL:0000710,1.77e-35,20;CL:0000075,2.00e-26,27;CL:0002077,4.34e-21,34;CL:0000333,9.06e-17,41;CL:0000133,6.21e-12,59;CL:0000221,6.82e-10,72;CL:0000149,2.61e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;4.67e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!8.05e-30!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.14e-57;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.58e-57,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.50e-08;15!UBERON:0007376;1.50e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,7.63976851116555,4.68869788840188,0,4.8328921570562,1.20137223137567,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3121399928321,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CPN1 | |||
}} |
Latest revision as of 19:40, 15 September 2015
Short description: | p3@CPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CPN1_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | -13bp_to_ENST00000441382_5end |
EntrezGene: | CPN1 |
HGNC: | 2312 |
UniProt: | B1AP58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.74e-70 | 10 |
melanoblast | 2.74e-70 | 10 |
pigment cell | 2.07e-50 | 14 |
light melanocyte | 1.23e-38 | 3 |
neurecto-epithelial cell | 1.77e-35 | 20 |
columnar/cuboidal epithelial cell | 2.00e-26 | 27 |
ecto-epithelial cell | 4.34e-21 | 34 |
migratory neural crest cell | 9.06e-17 | 41 |
neurectodermal cell | 6.21e-12 | 59 |
ectodermal cell | 6.82e-10 | 72 |
visual pigment cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.58e-57 | 2 |