FFCP PHASE1:Hg19::chrX:48432865..48432880,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:48432865..48432880,+
|short_description=p2@RBM3
|description=CAGE_peak_2_at_RBM3_5end
|association_with_transcript=0bp_to_ENST00000466764,ENST00000488216_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5935 | |EntrezGene=5935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9900 | |HGNC=9900 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466764,ENST00000488216_5end | |||
|cluster_id=chrX:48432865..48432880,+ | |||
|description=CAGE_peak_2_at_RBM3_5end | |||
|id=chrX:48432865..48432880,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.80e-26!42;CL:0000034!5.10e-26!444;CL:0000738!9.40e-26!140;CL:0000003!3.04e-25!722;CL:0000723!7.53e-25!436;CL:0000012!9.11e-25!682;CL:0000048!1.67e-24!430;CL:0002031!4.62e-24!124;CL:0002087!2.68e-23!119;CL:0000548!4.85e-23!679;CL:0000004!4.85e-23!679;CL:0000255!4.85e-23!679;CL:0000860!5.44e-23!45;CL:0000037!1.56e-22!172;CL:0000566!1.56e-22!172;CL:0000144!2.85e-22!625;CL:0002371!1.13e-21!591;CL:0000988!9.05e-21!182;CL:0002032!8.84e-20!165;CL:0000837!8.84e-20!165;CL:0000219!5.28e-17!390;CL:0000134!6.78e-17!358;CL:0002320!1.38e-16!365;CL:0002009!1.40e-15!65;CL:0000839!9.38e-15!70;CL:0002194!1.37e-14!63;CL:0000576!1.37e-14!63;CL:0000040!1.37e-14!63;CL:0000559!1.37e-14!63;CL:0000557!1.70e-14!71;CL:0000766!7.27e-14!76;CL:0000763!1.04e-11!112;CL:0000049!1.04e-11!112;CL:0000063!1.37e-11!578;CL:0000838!1.10e-08!52;CL:0000542!2.81e-08!53;CL:0000051!2.81e-08!53;CL:0000791!2.64e-07!18;CL:0000789!2.64e-07!18;CL:0002420!2.64e-07!18;CL:0002419!2.64e-07!18;CL:0000790!2.64e-07!18;CL:0000084!6.64e-07!25;CL:0000827!6.64e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.22e-19;33!CL:0002057;3.22e-19;33!CL:0000576;4.64e-14;48!CL:0000473;9.10e-13;39!CL:0000234;9.10e-13;39!CL:0002087;3.02e-09;104!CL:0000766;5.85e-09;69!CL:0000791;2.51e-07;18!CL:0000789;2.51e-07;18!CL:0002419;2.51e-07;18!CL:0000084;6.23e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-27,136;CL:0000034,3.78e-27,441;CL:0000860,2.80e-26,42;CL:0002057,2.80e-26,42;CL:0002031,4.78e-26,120;CL:0000723,5.86e-26,433;CL:0000048,1.31e-25,427;CL:0002087,2.69e-25,115;CL:0000037,4.70e-24,168;CL:0000988,2.76e-22,177;CL:0000473,6.55e-22,48;CL:0000234,6.55e-22,48;CL:0002032,3.26e-21,161;CL:0000837,3.26e-21,161;CL:0002009,6.81e-18,61;CL:0000219,1.02e-17,386;CL:0000134,1.23e-17,354;CL:0002320,2.58e-17,361;CL:0000839,7.39e-17,66;CL:0002194,7.62e-17,59;CL:0000576,7.62e-17,59;CL:0000040,7.62e-17,59;CL:0000559,7.62e-17,59;CL:0000557,1.50e-16,67;CL:0000766,9.27e-16,72;CL:0000763,5.36e-13,108;CL:0000049,5.36e-13,108;CL:0000838,1.10e-08,52;CL:0000542,2.81e-08,53;CL:0000051,2.81e-08,53;CL:0000791,2.64e-07,18;CL:0000789,2.64e-07,18;CL:0002420,2.64e-07,18;CL:0002419,2.64e-07,18;CL:0000790,2.64e-07,18;CL:0000084,6.64e-07,25;CL:0000827,6.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;5.57e-19;42!CL:0000790;2.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.11e-16!375;UBERON:0002204!1.23e-15!167;UBERON:0002371!4.94e-14!80;UBERON:0001474!7.02e-14!86;UBERON:0004765!2.44e-13!101;UBERON:0001434!2.44e-13!101;UBERON:0002390!6.98e-12!102;UBERON:0003061!6.98e-12!102;UBERON:0002193!1.34e-11!112;UBERON:0003081!2.24e-11!216;UBERON:0002405!2.02e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.12e-17,371;UBERON:0002204,3.27e-17,167;UBERON:0002371,7.09e-16,76;UBERON:0001474,1.29e-15,82;UBERON:0004765,1.36e-15,90;UBERON:0001434,6.53e-15,100;UBERON:0002405,5.00e-14,93;UBERON:0002390,2.88e-13,98;UBERON:0003061,2.88e-13,98;UBERON:0002193,7.03e-13,108;UBERON:0003081,1.16e-12,203;UBERON:0000926,8.14e-08,315;UBERON:0004120,8.14e-08,315;UBERON:0006603,8.14e-08,315 | |||
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| ||
|short_description=p2@RBM3 | |||
}} | }} |
Latest revision as of 19:17, 15 September 2015
Short description: | p2@RBM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466764, ENST00000488216_5end |
EntrezGene: | RBM3 |
HGNC: | 9900 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.12e-17 | 371 |
musculoskeletal system | 3.27e-17 | 167 |
bone marrow | 7.09e-16 | 76 |
bone element | 1.29e-15 | 82 |
skeletal element | 1.36e-15 | 90 |
skeletal system | 6.53e-15 | 100 |
immune system | 5.00e-14 | 93 |
hematopoietic system | 2.88e-13 | 98 |
blood island | 2.88e-13 | 98 |
hemolymphoid system | 7.03e-13 | 108 |
lateral plate mesoderm | 1.16e-12 | 203 |
mesoderm | 8.14e-08 | 315 |
mesoderm-derived structure | 8.14e-08 | 315 |
presumptive mesoderm | 8.14e-08 | 315 |