FFCP PHASE1:Hg19::chr5:14440872..14440890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=-37bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14440872..14440890,+ | |||
|coexpression_cluster_id=C950 | |||
|description=CAGE_peak_13_at_TRIO_5end | |description=CAGE_peak_13_at_TRIO_5end | ||
|id=chr5:14440872..14440890,+ | |id=chr5:14440872..14440890,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.33e-25!180;CL:0000057!2.34e-18!75;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000183!3.16e-18!59;CL:0000187!6.90e-16!54;CL:0002620!2.46e-13!23;CL:0000393!3.59e-13!60;CL:0000211!3.59e-13!60;CL:0000048!9.84e-12!430;CL:0000723!4.26e-11!436;CL:0000034!2.76e-10!444;CL:0000192!7.97e-10!42;CL:0000514!7.97e-10!42;CL:0000188!1.28e-09!9;CL:0002539!2.10e-09!10;CL:0000359!6.00e-09!32;CL:0002551!2.04e-07!6;CL:0000222!2.66e-07!119;CL:0000630!3.95e-07!9 | |ontology_enrichment_celltype=CL:0000055!3.33e-25!180;CL:0000057!2.34e-18!75;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000183!3.16e-18!59;CL:0000187!6.90e-16!54;CL:0002620!2.46e-13!23;CL:0000393!3.59e-13!60;CL:0000211!3.59e-13!60;CL:0000048!9.84e-12!430;CL:0000723!4.26e-11!436;CL:0000034!2.76e-10!444;CL:0000192!7.97e-10!42;CL:0000514!7.97e-10!42;CL:0000188!1.28e-09!9;CL:0002539!2.10e-09!10;CL:0000359!6.00e-09!32;CL:0002551!2.04e-07!6;CL:0000222!2.66e-07!119;CL:0000630!3.95e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002539;7.11e-14;10!CL:0002582;8.49e-14;3!CL:0000708;1.50e-13;3!CL:0000188;1.10e-10;9!CL:0000359;4.32e-10;32!CL:0000569;5.36e-10;4!CL:0002549;6.54e-10;2!CL:0002583;1.14e-09;2!CL:0002334;7.43e-09;12!CL:0000187;3.01e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.54e-14,10;CL:0002582,6.91e-14,3;CL:0000680,7.43e-14,58;CL:0000056,7.43e-14,58;CL:0000355,7.43e-14,58;CL:0000708,1.01e-13,3;CL:0000187,6.07e-13,55;CL:0000048,1.42e-11,427;CL:0000393,2.42e-11,61;CL:0000211,2.42e-11,61;CL:0000723,2.80e-11,433;CL:0000034,6.75e-11,441;CL:0000359,8.90e-11,32;CL:0000188,9.61e-11,9;CL:0000569,5.90e-10,4;CL:0000011,5.90e-10,4;CL:0002549,6.56e-10,2;CL:0002583,1.05e-09,2;CL:0002334,6.63e-09,12;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43;CL:0000057,1.54e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000011;5.36e-10;4!CL:0000355;1.07e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!4.95e-10!14 | |ontology_enrichment_disease=DOID:2394!4.95e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.67e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.48e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.06e-23!70;UBERON:0000914!8.83e-20!83;UBERON:0002329!8.83e-20!83;UBERON:0003077!8.83e-20!83;UBERON:0003059!8.83e-20!83;UBERON:0007282!8.83e-20!83;UBERON:0009618!8.83e-20!83;UBERON:0007285!8.83e-20!83;UBERON:0000486!1.76e-18!82;UBERON:0002385!3.75e-18!63;UBERON:0001015!3.75e-18!63;UBERON:0000383!3.75e-18!63;UBERON:0001134!3.92e-17!61;UBERON:0002036!3.92e-17!61;UBERON:0003082!3.92e-17!61;UBERON:0005256!2.28e-12!143;UBERON:0000947!4.10e-11!21;UBERON:0010191!4.10e-11!21;UBERON:0001135!7.02e-11!15;UBERON:0002199!1.61e-10!45;UBERON:0002416!1.61e-10!45;UBERON:0004573!2.42e-10!33;UBERON:0004571!2.42e-10!33;UBERON:0001637!1.77e-09!42;UBERON:0003509!1.77e-09!42;UBERON:0004572!1.77e-09!42;UBERON:0004237!2.10e-09!10;UBERON:0004695!2.10e-09!10;UBERON:0002111!2.10e-09!10;UBERON:0004178!2.10e-09!10;UBERON:0002097!5.08e-09!40;UBERON:0002200!1.62e-08!11;UBERON:0006876!1.62e-08!11;UBERON:0000475!1.86e-08!365;UBERON:0002049!2.35e-08!79;UBERON:0007798!2.35e-08!79;UBERON:0002067!4.41e-08!9;UBERON:0004016!4.41e-08!9;UBERON:0010083!4.41e-08!9;UBERON:0000992!6.37e-08!13;UBERON:0000490!1.24e-07!138;UBERON:0002100!1.64e-07!216;UBERON:0004872!1.96e-07!84;UBERON:0004535!2.33e-07!110;UBERON:0005284!3.10e-07!5;UBERON:0000119!3.99e-07!312;UBERON:0001009!7.16e-07!113;UBERON:0000991!8.83e-07!21;UBERON:0009196!8.83e-07!21;UBERON:0009117!8.83e-07!21;UBERON:0005564!8.83e-07!21 | |ontology_enrichment_uberon=UBERON:0004290!5.06e-23!70;UBERON:0000914!8.83e-20!83;UBERON:0002329!8.83e-20!83;UBERON:0003077!8.83e-20!83;UBERON:0003059!8.83e-20!83;UBERON:0007282!8.83e-20!83;UBERON:0009618!8.83e-20!83;UBERON:0007285!8.83e-20!83;UBERON:0000486!1.76e-18!82;UBERON:0002385!3.75e-18!63;UBERON:0001015!3.75e-18!63;UBERON:0000383!3.75e-18!63;UBERON:0001134!3.92e-17!61;UBERON:0002036!3.92e-17!61;UBERON:0003082!3.92e-17!61;UBERON:0005256!2.28e-12!143;UBERON:0000947!4.10e-11!21;UBERON:0010191!4.10e-11!21;UBERON:0001135!7.02e-11!15;UBERON:0002199!1.61e-10!45;UBERON:0002416!1.61e-10!45;UBERON:0004573!2.42e-10!33;UBERON:0004571!2.42e-10!33;UBERON:0001637!1.77e-09!42;UBERON:0003509!1.77e-09!42;UBERON:0004572!1.77e-09!42;UBERON:0004237!2.10e-09!10;UBERON:0004695!2.10e-09!10;UBERON:0002111!2.10e-09!10;UBERON:0004178!2.10e-09!10;UBERON:0002097!5.08e-09!40;UBERON:0002200!1.62e-08!11;UBERON:0006876!1.62e-08!11;UBERON:0000475!1.86e-08!365;UBERON:0002049!2.35e-08!79;UBERON:0007798!2.35e-08!79;UBERON:0002067!4.41e-08!9;UBERON:0004016!4.41e-08!9;UBERON:0010083!4.41e-08!9;UBERON:0000992!6.37e-08!13;UBERON:0000490!1.24e-07!138;UBERON:0002100!1.64e-07!216;UBERON:0004872!1.96e-07!84;UBERON:0004535!2.33e-07!110;UBERON:0005284!3.10e-07!5;UBERON:0000119!3.99e-07!312;UBERON:0001009!7.16e-07!113;UBERON:0000991!8.83e-07!21;UBERON:0009196!8.83e-07!21;UBERON:0009117!8.83e-07!21;UBERON:0005564!8.83e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.42e-15;31!UBERON:0001015;1.42e-15;31!UBERON:0000383;1.42e-15;31!UBERON:0004237;7.11e-14;10!UBERON:0004695;7.11e-14;10!UBERON:0002111;7.11e-14;10!UBERON:0004178;7.11e-14;10!UBERON:0005284;1.35e-13;5!UBERON:0003210;1.50e-13;3!UBERON:0005629;6.54e-10;2!UBERON:0005358;6.54e-10;2!UBERON:0001886;6.54e-10;2!UBERON:0004086;6.54e-10;2!UBERON:0005282;6.54e-10;2!UBERON:0005281;6.54e-10;2!UBERON:0002119;1.14e-09;4!UBERON:0001135;4.82e-09;15!UBERON:0000947;1.78e-08;21!UBERON:0010191;1.78e-08;21!UBERON:0004573;3.01e-08;33!UBERON:0004571;3.01e-08;33!UBERON:0001134;3.06e-08;16!UBERON:0002036;3.06e-08;16!UBERON:0002072;4.28e-08;5!UBERON:0000992;9.73e-08;13!UBERON:0002067;4.11e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.08e-17,71;UBERON:0003059,2.08e-17,71;UBERON:0007282,2.08e-17,71;UBERON:0004290,2.08e-17,71;UBERON:0009618,2.08e-17,71;UBERON:0003077,4.23e-17,72;UBERON:0007285,4.23e-17,72;UBERON:0007524,8.42e-17,73;UBERON:0007503,2.01e-15,78;UBERON:0000486,3.27e-14,83;UBERON:0004237,3.54e-14,10;UBERON:0004695,3.54e-14,10;UBERON:0002111,3.54e-14,10;UBERON:0004178,3.54e-14,10;UBERON:0005284,8.34e-14,5;UBERON:0003210,1.01e-13,3;UBERON:0001134,9.97e-13,62;UBERON:0002036,9.97e-13,62;UBERON:0003082,9.97e-13,62;UBERON:0002385,3.23e-12,64;UBERON:0001015,3.23e-12,64;UBERON:0000383,3.23e-12,64;UBERON:0005256,1.95e-10,122;UBERON:0005629,6.56e-10,2;UBERON:0005358,6.56e-10,2;UBERON:0001886,6.56e-10,2;UBERON:0004086,6.56e-10,2;UBERON:0005282,6.56e-10,2;UBERON:0005281,6.56e-10,2;UBERON:0002119,9.29e-10,4;UBERON:0001135,3.07e-09,15;UBERON:0000947,1.25e-08,21;UBERON:0010191,1.25e-08,21;UBERON:0004573,1.98e-08,33;UBERON:0004571,1.98e-08,33;UBERON:0002072,4.56e-08,5;UBERON:0000992,9.20e-08,13;UBERON:0000490,9.45e-08,148;UBERON:0002067,5.65e-07,9;UBERON:0004016,5.65e-07,9;UBERON:0010083,5.65e-07,9;UBERON:0000926,6.52e-07,315;UBERON:0004120,6.52e-07,315;UBERON:0006603,6.52e-07,315;UBERON:0003104,8.08e-07,160;UBERON:0009142,8.08e-07,160 | |||
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| ||
|short_description=p13@TRIO | |short_description=p13@TRIO | ||
}} | }} |
Latest revision as of 19:17, 15 September 2015
Short description: | p13@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | -37bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.54e-14 | 10 |
visceral preadipocyte | 6.91e-14 | 3 |
muscle precursor cell | 7.43e-14 | 58 |
myoblast | 7.43e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.43e-14 | 58 |
leptomeningeal cell | 1.01e-13 | 3 |
muscle cell | 6.07e-13 | 55 |
multi fate stem cell | 1.42e-11 | 427 |
electrically responsive cell | 2.42e-11 | 61 |
electrically active cell | 2.42e-11 | 61 |
somatic stem cell | 2.80e-11 | 433 |
stem cell | 6.75e-11 | 441 |
vascular associated smooth muscle cell | 8.90e-11 | 32 |
cell of skeletal muscle | 9.61e-11 | 9 |
cardiac mesenchymal cell | 5.90e-10 | 4 |
migratory trunk neural crest cell | 5.90e-10 | 4 |
fibroblast of choroid plexus | 6.56e-10 | 2 |
subcutaneous preadipocyte | 1.05e-09 | 2 |
preadipocyte | 6.63e-09 | 12 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
fibroblast | 1.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.48e-07 | 14 |