FFCP PHASE1:Hg19::chr4:14113507..14113534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152742 | |EntrezGene=152742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-57bp_to_ENST00000502759,NR_033931_5end | |||
|cluster_id=chr4:14113507..14113534,+ | |||
|coexpression_cluster_id=C4374 | |||
|description=CAGE_peak_1_at_LOC152742_5end | |||
|id=chr4:14113507..14113534,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.18e-19!75;CL:0000055!3.41e-18!180;CL:0002494!4.63e-11!16;CL:0002620!1.89e-09!23;CL:0000680!1.28e-08!57;CL:0000056!1.28e-08!57;CL:0000355!1.28e-08!57;CL:0000183!5.87e-08!59;CL:0000569!9.10e-08!4;CL:0000011!9.10e-08!4;CL:0002556!1.60e-07!6;CL:0000187!2.46e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.80e-29;6!CL:0000098;1.80e-29;6!CL:0002167;1.80e-29;6!CL:0002601;1.32e-12;1!CL:0000569;7.11e-12;4!CL:0000710;4.88e-09;20!CL:0000075;9.71e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.67e-29,6;CL:0000098,1.67e-29,6;CL:0002167,1.67e-29,6;CL:0002601,1.40e-12,1;CL:0000569,5.70e-12,4;CL:0000011,5.70e-12,4;CL:0000710,4.78e-09,20;CL:0000075,9.57e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000011;7.11e-12;4 | |||
|ontology_enrichment_disease=DOID:0060084!8.04e-07!3;DOID:127!8.04e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.79e-16;3!DOID:127;9.79e-16;3!DOID:0060072;4.83e-12;4!DOID:4231;5.26e-07;2!DOID:1907;5.26e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.83e-16,3;DOID:127,7.83e-16,3;DOID:0060072,4.09e-12,4;DOID:4231,5.41e-07,2;DOID:1907,5.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.00e-10!83;UBERON:0002329!3.00e-10!83;UBERON:0003077!3.00e-10!83;UBERON:0003059!3.00e-10!83;UBERON:0007282!3.00e-10!83;UBERON:0009618!3.00e-10!83;UBERON:0007285!3.00e-10!83;UBERON:0001134!1.12e-08!61;UBERON:0002036!1.12e-08!61;UBERON:0003082!1.12e-08!61;UBERON:0004290!2.11e-08!70;UBERON:0002385!3.24e-08!63;UBERON:0001015!3.24e-08!63;UBERON:0000383!3.24e-08!63;UBERON:0000948!8.84e-08!24;UBERON:0005498!8.84e-08!24;UBERON:0004140!8.84e-08!24;UBERON:0009881!8.84e-08!24;UBERON:0004141!8.84e-08!24;UBERON:0003084!8.84e-08!24;UBERON:0007005!8.84e-08!24;UBERON:0004139!8.84e-08!24;UBERON:0004291!8.84e-08!24;UBERON:0001758!1.60e-07!6;UBERON:0003672!1.60e-07!6;UBERON:0003102!4.83e-07!95;UBERON:0000486!5.26e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.88e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.89e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.794455084879313,0,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,1.83892677479412,0.751190294532984,0.226864366320042,0,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0,0.337552664482532,0,0,0.276149695926898,0.161646056818812,1.06502877754984,0.201504196455281,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,1.73472656537328,1.40569697991256,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.657017248110473,0,0.348631135379878,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0.404364963146632,0,0.421258456238981,0,0.487426979262569,0,0.545999645631943,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,2.12856638442359,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.77958931012458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,1.72844298240254,2.61269888087527,0,0,3.57814845749386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0,0.554805861502613,0.757612021100357,0,0,1.60188047877847,1.81477108515887,0.466311601748341,0.147855149989634,0,0,0,1.24411862352257,0.265841714557995,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0.244736704506468,8.05899784866693,0,0,0.176689145945881,0,2.02730928783687,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | 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| ||
|short_description=p1@LOC152742 | |||
}} | }} |
Latest revision as of 19:09, 15 September 2015
Short description: | p1@LOC152742 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC152742_5end |
Coexpression cluster: | C4374_bone_mesothelioma_Olfactory_liposarcoma_leiomyoma_Smooth_mesenchymal |
Association with transcript: | -57bp_to_ENST00000502759, NR_033931_5end |
EntrezGene: | LOC152742 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.67e-29 | 6 |
sensory epithelial cell | 1.67e-29 | 6 |
olfactory epithelial cell | 1.67e-29 | 6 |
uterine smooth muscle cell | 1.40e-12 | 1 |
cardiac mesenchymal cell | 5.70e-12 | 4 |
migratory trunk neural crest cell | 5.70e-12 | 4 |
neurecto-epithelial cell | 4.78e-09 | 20 |
columnar/cuboidal epithelial cell | 9.57e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.89e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.83e-16 | 3 |
leiomyoma | 7.83e-16 | 3 |
benign neoplasm | 4.09e-12 | 4 |
histiocytoma | 5.41e-07 | 2 |
malignant fibroxanthoma | 5.41e-07 | 2 |