FFCP PHASE1:Hg19::chr1:108507881..108507897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10451 | |EntrezGene=10451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12659 | |HGNC=12659 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKW4 | |UniProt=Q9UKW4 | ||
|association_with_transcript=-115bp_to_ENST00000370056_5end | |association_with_transcript=-115bp_to_ENST00000370056_5end | ||
|cluster_id=chr1:108507881..108507897,- | |||
|description=CAGE_peak_5_at_VAV3_5end | |description=CAGE_peak_5_at_VAV3_5end | ||
|id=chr1:108507881..108507897,- | |id=chr1:108507881..108507897,- | ||
|ontology_enrichment_celltype=CL:0000037!5.82e-34!172;CL:0000566!5.82e-34!172;CL:0000738!2.68e-32!140;CL:0000988!7.47e-31!182;CL:0002032!4.53e-29!165;CL:0000837!4.53e-29!165;CL:0002087!9.61e-28!119;CL:0002031!1.91e-27!124;CL:0000766!2.95e-21!76;CL:0000557!6.66e-20!71;CL:0000763!2.87e-19!112;CL:0000049!2.87e-19!112;CL:0000839!4.55e-19!70;CL:0002194!5.33e-17!63;CL:0000576!5.33e-17!63;CL:0000040!5.33e-17!63;CL:0000559!5.33e-17!63;CL:0002009!5.07e-16!65;CL:0002057!7.11e-13!42;CL:0000860!2.43e-11!45;CL:0000838!1.44e-09!52;CL:0000542!3.32e-09!53;CL:0000051!3.32e-09!53;CL:0000236!4.82e-07!14 | |ontology_enrichment_celltype=CL:0000037!5.82e-34!172;CL:0000566!5.82e-34!172;CL:0000738!2.68e-32!140;CL:0000988!7.47e-31!182;CL:0002032!4.53e-29!165;CL:0000837!4.53e-29!165;CL:0002087!9.61e-28!119;CL:0002031!1.91e-27!124;CL:0000766!2.95e-21!76;CL:0000557!6.66e-20!71;CL:0000763!2.87e-19!112;CL:0000049!2.87e-19!112;CL:0000839!4.55e-19!70;CL:0002194!5.33e-17!63;CL:0000576!5.33e-17!63;CL:0000040!5.33e-17!63;CL:0000559!5.33e-17!63;CL:0002009!5.07e-16!65;CL:0002057!7.11e-13!42;CL:0000860!2.43e-11!45;CL:0000838!1.44e-09!52;CL:0000542!3.32e-09!53;CL:0000051!3.32e-09!53;CL:0000236!4.82e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000784;9.39e-13;3!CL:0000775;1.23e-12;3!CL:0000235;5.34e-10;6!CL:0000094;6.59e-08;8!CL:0000236;6.42e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-22,136;CL:0000037,2.69e-22,168;CL:0000988,1.04e-20,177;CL:0002032,4.40e-19,161;CL:0000837,4.40e-19,161;CL:0002031,4.34e-15,120;CL:0002087,1.39e-14,115;CL:0000784,8.81e-13,3;CL:0000775,1.07e-12,3;CL:0000766,8.90e-12,72;CL:0000763,1.18e-10,108;CL:0000049,1.18e-10,108;CL:0000235,8.24e-10,6;CL:0000838,4.78e-09,52;CL:0000542,7.99e-09,53;CL:0000051,7.99e-09,53;CL:0000557,1.68e-08,67;CL:0000094,6.82e-08,8;CL:0000839,2.33e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.51e-23!102;UBERON:0003061!9.51e-23!102;UBERON:0002193!1.76e-22!112;UBERON:0002371!1.48e-17!80;UBERON:0001474!2.26e-17!86;UBERON:0002405!8.95e-15!115;UBERON:0004765!7.12e-13!101;UBERON:0001434!7.12e-13!101;UBERON:0007023!2.02e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.79e-08;2!UBERON:0005058;1.79e-08;2!UBERON:0009113;1.79e-08;2!UBERON:0004177;3.64e-07;5!UBERON:0005057;3.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.79e-11,98;UBERON:0003061,6.79e-11,98;UBERON:0002193,1.36e-10,108;UBERON:0002405,2.63e-09,93;UBERON:0002371,3.91e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,0,0,0,0,0,0,0,0.880801318004542,1.10799081706375,0.601633342410425,0.651032612147555,0.671746422719773,0.971680998056939,1.28787783817093,0.436194716338694,0.755751887377619,0.485168122375632,0.464858073811369,0.411167888021826,0,0.575384784644301,0.256160706529101,0.47296445977717,1.03423704220986,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,0.306083892370903,0.962787081228281,0,0.659702600373432,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0.434377689410233,1.21079900526674,1.10483290796269,0.316462387440884,0,0,0,0.561643155732475,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,2.73069305631066,0,1.28019066769952,0.800791974072025,3.4485146397269,0.661044872784862,1.90810750907073,0.569212969109448,0.587237189370939,1.52909291250092,2.64342657158052,2.24203425192614,0.790152254325231,0.983548850569165,0,0.205601498999509,0.334372990781356,1.62961133316795,1.4203434172042,1.94826728407911,0.334231370655521,0.589211814949674,1.77227115666897,1.89562704635511,0.25618263945135,0.130059347559878,0,0,0,0.444859689486181,0.802622484269139,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.639933055772092,0,0,1.64225599384209,2.01606743224732,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0.472674085820339,0,0.43917392846563,0.196468613246569,0,0,0,0.174129737299267,0,4.5313218618015,5.14795419702115,2.60020250930695,0,0,0,0,0,0,0,0.516833518338658,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.795178609928912,0.116193942869518,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0,0,0,0,0.984868024349589,0,1.33768046059855,0,0,0,0,0,0,0.492663237895943,0.176096868026452,1.24396869324463,2.30591925467138,0.75745460055828,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0.394061520403854,1.07813787429759,1.02674429023799,0,0,0.773288812777695,0,0.637938751653163,2.24702107184155,5.9832291840805,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.44737618286021,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,0,1.29694662238543,1.08006287447623,0,0,0,0,0,0.432807638929335,0.711418433484141,2.39139409093234,0,0.5745161103971,1.05836791361941,0,0.280797178113459,0.684704037099577,0,0,0.677167111206413,0,0.201799707191048,0.425846237690326,0,0.307240764308458,1.78940886313933,1.33479313369527,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.591095237907095,0.87754158861589,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,1.11255605286265,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.884612114798832,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.482259445395058,0.825236619583403,1.66176135211674,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0.0642292250964595,1.41696576325585,0,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.263091094251396,0,0.111231401892069,0,0.314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| ||
|short_description=p5@VAV3 | |short_description=p5@VAV3 | ||
}} | }} |
Latest revision as of 18:58, 15 September 2015
Short description: | p5@VAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VAV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_ENST00000370056_5end |
EntrezGene: | VAV3 |
HGNC: | 12659 |
UniProt: | Q9UKW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.04e-22 | 136 |
hematopoietic stem cell | 2.69e-22 | 168 |
hematopoietic cell | 1.04e-20 | 177 |
hematopoietic oligopotent progenitor cell | 4.40e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 4.34e-15 | 120 |
nongranular leukocyte | 1.39e-14 | 115 |
plasmacytoid dendritic cell | 8.81e-13 | 3 |
neutrophil | 1.07e-12 | 3 |
myeloid leukocyte | 8.90e-12 | 72 |
myeloid cell | 1.18e-10 | 108 |
common myeloid progenitor | 1.18e-10 | 108 |
macrophage | 8.24e-10 | 6 |
lymphoid lineage restricted progenitor cell | 4.78e-09 | 52 |
lymphocyte | 7.99e-09 | 53 |
common lymphoid progenitor | 7.99e-09 | 53 |
granulocyte monocyte progenitor cell | 1.68e-08 | 67 |
granulocyte | 6.82e-08 | 8 |
myeloid lineage restricted progenitor cell | 2.33e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.79e-11 | 98 |
blood island | 6.79e-11 | 98 |
hemolymphoid system | 1.36e-10 | 108 |
immune system | 2.63e-09 | 93 |
bone marrow | 3.91e-07 | 76 |