FFCP PHASE1:Hg19::chr19:1257665..1257686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=420bp_to_AK075506_5end | |association_with_transcript=420bp_to_AK075506_5end | ||
|cluster_id=chr19:1257665..1257686,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_15_at_MIDN_5end | |description=CAGE_peak_15_at_MIDN_5end | ||
|id=chr19:1257665..1257686,+ | |id=chr19:1257665..1257686,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.70e-07!42 | |ontology_enrichment_celltype=CL:0002057!1.70e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000775;9.50e-19;3!CL:0000097;4.31e-18;5!CL:0000094;4.90e-12;8!CL:0000163;4.06e-10;9!CL:0000081;9.00e-09;11!CL:0002231;1.16e-08;3!CL:0002541;2.15e-08;3!CL:0000511;6.53e-07;1!CL:0002625;6.53e-07;1!CL:0000216;6.53e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.65e-19,3;CL:0000097,3.83e-18,5;CL:0002028,3.83e-18,5;CL:0000094,4.61e-12,8;CL:0000766,1.53e-10,72;CL:0000163,3.80e-10,9;CL:0002231,6.67e-09,3;CL:0000081,8.62e-09,11;CL:0002541,2.51e-08,3;CL:0000738,3.37e-07,136;CL:0000511,4.01e-07,1;CL:0002625,4.01e-07,1;CL:0000216,4.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.53e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.15e-08;3!UBERON:0000920;2.15e-08;3!UBERON:0002079;6.53e-07;1!UBERON:0001136;6.53e-07;1!UBERON:0001343;6.53e-07;1!UBERON:0004910;6.53e-07;1!UBERON:0004813;6.53e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.51e-08,3;UBERON:0003124,8.50e-08,7;UBERON:0001136,4.01e-07,1;UBERON:0001343,4.01e-07,1;UBERON:0004910,4.01e-07,1;UBERON:0005154,4.01e-07,1;UBERON:0005295,4.01e-07,1;UBERON:0004813,4.01e-07,1;UBERON:0005297,4.01e-07,1;UBERON:0005294,4.01e-07,1;UBERON:0010141,4.01e-07,1;UBERON:0005891,4.01e-07,1;UBERON:0002079,5.37e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0,1.16318591023652,1.51150377475524,0.242584061187816,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,1.88242339542605,0.818718450173537,0,1.53041946185451,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.425208599930087,0,0.22465726229299,0,0.48217676009124,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,1.20964045934839,0.267440195783507,0,0,0,0,0.722878304769133,0.50133791063589,0.869079113764942,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.506522046658319,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,1.04574548582567,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.491953754172454,0,0.548751427043128,1.1240175325762,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0,0,1.14462964217194,1.65862492432618,1.15295962733569,1.51490920111656,0,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.862510299438069,0.256686072559497,1.27047312111232,0,0,0.335032530668698,0.637938751653163,28.4622669099929,50.8574480646842,24.4505152927261,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0,0,0.695068915744663,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0.606255142892519,1.66435439510497,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,2.05461064305758,0.601519410909855,1.74953878978203,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,1.14853107599234,0.650060246036521,1.6068392984416,0.676695028044854,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.445160178233687,0.495854746082934,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0.470719003883896,0,1.68471475667626,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0.139423744278603,0.307801034015188,0.455768223388005,0.23056390438806,0.359030577639089,0,1.5950057986596,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0.311064574191741,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0.288109595976299,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.247247575143499,0,0.0984274815147488,0,0,0,0.482259445395058,0.825236619583403,1.24632101408756,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0.105600336519406,0.179287339332845,0,1.42939065274673,0,0,1.62899880526114,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.747511887973863,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0.886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| 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| ||
|short_description=p15@MIDN | |short_description=p15@MIDN | ||
}} | }} |
Latest revision as of 18:46, 15 September 2015
Short description: | p15@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 420bp_to_AK075506_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.65e-19 | 3 |
mast cell | 3.83e-18 | 5 |
basophil mast progenitor cell | 3.83e-18 | 5 |
granulocyte | 4.61e-12 | 8 |
myeloid leukocyte | 1.53e-10 | 72 |
endocrine cell | 3.80e-10 | 9 |
epithelial cell of prostate | 6.67e-09 | 3 |
blood cell | 8.62e-09 | 11 |
chorionic membrane mesenchymal stem cell | 2.51e-08 | 3 |
leukocyte | 3.37e-07 | 136 |
androgen binding protein secreting cell | 4.01e-07 | 1 |
seminiferous tubule epithelial cell | 4.01e-07 | 1 |
Sertoli cell | 4.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.51e-08 | 3 |
chorion | 8.50e-08 | 7 |
mesothelium | 4.01e-07 | 1 |
seminiferous tubule of testis | 4.01e-07 | 1 |
epithelium of male gonad | 4.01e-07 | 1 |
epithelial cord | 4.01e-07 | 1 |
sex cord | 4.01e-07 | 1 |
seminiferous tubule epithelium | 4.01e-07 | 1 |
testis sex cord | 4.01e-07 | 1 |
genital ridge | 4.01e-07 | 1 |
primitive sex cord of indifferent gonad | 4.01e-07 | 1 |
coelomic epithelium | 4.01e-07 | 1 |
left cardiac atrium | 5.37e-07 | 1 |